RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 OR10K1Q8NGX5 313 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 SLC25A43Q8WUT9 341 aaPredicted RBP12.52□□□□□ -0.41
HMGA1-203ENST00000374116 GCDHQ92947 438 aaPredicted RBP12.52□□□□□ -0.41
HMGA1-203ENST00000374116 PPP1R14AQ96A00 147 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 WDYHV1Q96HA8 205 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 PDCD10Q9BUL8 212 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 MRPL13Q9BYD1 178 aaKnown RBP12.52□□□□□ -0.41
HMGA1-203ENST00000374116 NKIRAS2Q9NYR9 191 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 MRPL15Q9P015 296 aaKnown RBP12.52□□□□□ -0.41
HMGA1-203ENST00000374116 ZNF69Q9UC07 566 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 OR52A1Q9UKL2 312 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 EMC9Q9Y3B6 208 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 IGKV1D-43A0A0B4J1Z2 117 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 LOC100289279A0A1B0GTE1 492 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 LOC102725191A0A1B0GVB3 256 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 MEGF11A6BM72 1044 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 F5H5P2 479 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 EIF1AYO14602 144 aaKnown RBP12.51□□□□□ -0.41
HMGA1-203ENST00000374116 TNFSF11O14788 317 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 SSX5O60225 188 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 EIF1BO60739 113 aaKnown RBP12.51□□□□□ -0.41
HMGA1-203ENST00000374116 CTAG2O75638 210 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 ITGA5P08648 1049 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 CD37P11049 281 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 POU3F4P49335 361 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 THEM4Q5T1C6 240 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 SFRP4Q6FHJ7 346 aaPredicted RBP12.51□□□□□ -0.41
HMGA1-203ENST00000374116 MYO7BQ6PIF6 2116 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 CORO6Q6QEF8 472 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 LDLRAD3Q86YD5 345 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.51□□□□□ -0.41
HMGA1-203ENST00000374116 UEVLDQ8IX04 471 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 OR10H5Q8NGA6 315 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 OR51D1Q8NGF3 324 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 RNF133Q8WVZ7 376 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 FAM3DQ96BQ1 224 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 SARAFQ96BY9 339 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 ZNF845Q96IR2 970 aaPredicted RBP12.51□□□□□ -0.41
HMGA1-203ENST00000374116 G6PC2Q9NQR9 355 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 GSN-AS1Q9NRJ2 163 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 EDARQ9UNE0 448 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 HDGFL3Q9Y3E1 203 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 POLEQ07864 2286 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 TRGV8A0A0C4DH27 118 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 TMEM269A0A1B0GVZ9 245 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 UBE2QL1A1L167 161 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 GGT3PA6NGU5 568 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 EIF3GO75821 320 aaKnown RBP eCLIP12.51□□□□□ -0.41
HMGA1-203ENST00000374116 H2BFMP0C1H6 154 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 TMIGD3P0DMS9 266 aaPredicted RBP12.51□□□□□ -0.41
HMGA1-203ENST00000374116 ZNF708P17019 499 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 PAX6P26367 422 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 GUCA2BQ16661 112 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 C2orf76Q3KRA6 126 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 AVPI1Q5T686 147 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 TMEM244Q5VVB8 128 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 ASPHD2Q6ICH7 369 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 GGNQ86UU5 652 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 DOLPP1Q86YN1 238 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 LINC00346Q8IVM7 164 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 PUSL1Q8N0Z8 303 aaKnown RBP12.51□□□□□ -0.41
HMGA1-203ENST00000374116 OR51M1Q9H341 326 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 RNF122Q9H9V4 155 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 TAS2R8Q9NYW2 309 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 TAS2R3Q9NYW6 316 aa12.51□□□□□ -0.41
HMGA1-203ENST00000374116 A0A0D9SG52 128 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 A0A0J9YW62 118 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 TMEM218A2RU14 115 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 RFPL4AA6NLU0 287 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 DISC1C4P0D8 188 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 RFPL4AL1F8VTS6 287 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 H7C417 338 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 RBBP9O75884 186 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 ZNF17P17021 662 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 KLK2P20151 261 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 LAP3P28838 519 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 DCTDP32321 178 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 FAUP35544 74 aaKnown RBP12.5□□□□□ -0.41
HMGA1-203ENST00000374116 MMP16P51512 607 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 PLA2G7Q13093 441 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 ZNF345Q14585 488 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 SLC36A1Q7Z2H8 476 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 SPAG16Q8N0X2 631 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 LILRB2Q8N423 598 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 OR13C3Q8NGS6 347 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 FAM57AQ8TBR7 257 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 C11orf40Q8WZ69 217 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 SLC25A44Q96H78 314 aaPredicted RBP12.5□□□□□ -0.41
HMGA1-203ENST00000374116 OR5B2Q96R09 309 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 TSNAXQ99598 290 aaKnown RBP12.5□□□□□ -0.41
HMGA1-203ENST00000374116 TCEAL7Q9BRU2 100 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 TAS2R4Q9NYW5 299 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 MTFP1Q9UDX5 166 aa12.5□□□□□ -0.41
HMGA1-203ENST00000374116 TRAV20A0A0B4J274 112 aa12.49□□□□□ -0.41
HMGA1-203ENST00000374116 LOC107986453A0A1B0GWG9 222 aa12.49□□□□□ -0.41
HMGA1-203ENST00000374116 NUDT19A8MXV4 375 aa12.49□□□□□ -0.41
HMGA1-203ENST00000374116 ZNF814B7Z6K7 855 aa12.49□□□□□ -0.41
HMGA1-203ENST00000374116 TRAF3IP2O43734 574 aaPredicted RBP12.49□□□□□ -0.41
HMGA1-203ENST00000374116 ACTL6AO96019 429 aa12.49□□□□□ -0.41
HMGA1-203ENST00000374116 IGHG1P01857 330 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms