RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 RTN4IP1Q8WWV3 396 aaPredicted RBP9.48□□□□□ -0.89
PGK1-201ENST00000373316 DNAJA3Q96EY1 480 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 ARV1Q9H2C2 271 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 WDR54Q9H977 334 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 PURGQ9UJV8 347 aaKnown RBP9.48□□□□□ -0.89
PGK1-201ENST00000373316 MPC1Q9Y5U8 109 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 CCDC187A0A096LP49 1063 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 FITM1A5D6W6 292 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 ZNF732B4DXR9 585 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 PYCARD-AS1I3L0S3 204 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 PTP4A3O75365 173 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 GABRA1P14867 456 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 CHRNB4P30926 498 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 HLXQ14774 488 aaPredicted RBP9.48□□□□□ -0.89
PGK1-201ENST00000373316 Q6ZRG5 221 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 SMIM15Q7Z3B0 74 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 TVP23CQ96ET8 276 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 SCMH1Q96GD3 660 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 CA10Q9NS85 328 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 PCDHGA5Q9Y5G8 931 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 PUS1Q9Y606 427 aaKnown RBP eCLIP9.48□□□□□ -0.89
PGK1-201ENST00000373316 NPIPB13A6NJU9 1138 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 B4DEV8 164 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 NPIPB4C9JG80 1138 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 ZFPL1O95159 310 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 RPS2P15880 293 aaKnown RBP9.48□□□□□ -0.89
PGK1-201ENST00000373316 FOXO1Q12778 655 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 CEBPEQ15744 281 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 SMIM21Q3B7S5 101 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 BEX5Q5H9J7 111 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 TMEM65Q6PI78 240 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 RHOUQ7L0Q8 258 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 ZFP82Q8N141 532 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 ZBTB34Q8NCN2 500 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 SMRP1Q8NCR6 262 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 OR8D4Q8NGM9 314 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 CCL4L1Q8NHW4 92 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 GPR119Q8TDV5 335 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 CCDC74BQ96LY2 380 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 HINT2Q9BX68 163 aa9.48□□□□□ -0.89
PGK1-201ENST00000373316 ZFC3H1O60293 1989 aaKnown RBP9.47□□□□□ -0.89
PGK1-201ENST00000373316 CKAP5Q14008 2032 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 FFAR1O14842 300 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 CTSVO60911 334 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 CST2P09228 141 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 MMP9P14780 707 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 P2RY1P47900 373 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 PNRC1Q12796 327 aaPredicted RBP9.47□□□□□ -0.89
PGK1-201ENST00000373316 KLF9Q13886 244 aaPredicted RBP9.47□□□□□ -0.89
PGK1-201ENST00000373316 TRIM61Q5EBN2 209 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 OLIG3Q7RTU3 272 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 D2HGDHQ8N465 521 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 KTI12Q96EK9 354 aaPredicted RBP9.47□□□□□ -0.89
PGK1-201ENST00000373316 USB1Q9BQ65 265 aaKnown RBP9.47□□□□□ -0.89
PGK1-201ENST00000373316 CYR61O00622 381 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 ABCD4O14678 606 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 OIP5O43482 229 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 OR2C1O95371 312 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 SPTBP11277 2137 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 PTHLHP12272 177 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 RAB5AP20339 215 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 KIR2DL1P43626 348 aaPredicted RBP9.47□□□□□ -0.89
PGK1-201ENST00000373316 RAB4BP61018 213 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 ST3GAL2Q16842 350 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 PWWP2BQ6NUJ5 590 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 OR4S1Q8NGB4 309 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 SLC35E1Q96K37 410 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 FOXN4Q96NZ1 517 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 SAMD10Q9BYL1 202 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 CALHM2Q9HA72 323 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 DYNLRB1Q9NP97 96 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 SSUH2Q9Y2M2 353 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 C9orf170A2RU37 121 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 ZNF705FA8MVS1 300 aaPredicted RBP9.47□□□□□ -0.89
PGK1-201ENST00000373316 LRP3O75074 770 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 ZNF705DP0CH99 300 aaPredicted RBP9.47□□□□□ -0.89
PGK1-201ENST00000373316 ZNF705BP0CI00 300 aaPredicted RBP9.47□□□□□ -0.89
PGK1-201ENST00000373316 OMGP23515 440 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 GNG3P63215 75 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 MRPS34P82930 218 aaKnown RBP9.47□□□□□ -0.89
PGK1-201ENST00000373316 AKR1C1Q04828 323 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 SIGIRRQ6IA17 410 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 BOLLQ8N9W6 283 aaKnown RBP9.47□□□□□ -0.89
PGK1-201ENST00000373316 FRZBQ92765 325 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 RNF2Q99496 336 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 RHNO1Q9BSD3 238 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 CABIN1Q9Y6J0 2220 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 LOC400499M0QZD8 3231 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 IGHV1OR21-1A0A087WYE8 117 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 PPP5D1E7EU14 171 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 TUSC2O75896 110 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 ABOP16442 354 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 TGFBR1P36897 503 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 CD200P41217 278 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 BPIFB3P59826 476 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 PLGLAQ15195 96 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 SHEQ5VZ18 495 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 MARCH1Q8TCQ1 289 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 HPSE2Q8WWQ2 592 aa9.47□□□□□ -0.89
PGK1-201ENST00000373316 NEIL1Q96FI4 390 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms