RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 TERTO14746 1132 aaKnown RBP10.24□□□□□ -0.77
PTPRF-203ENST00000372407 CST7O76096 145 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 CLEC3BP05452 202 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 FPR2P25090 351 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 FABP6P51161 128 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 EMP3P54852 163 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 DSCR4P56555 118 aaPredicted RBP10.24□□□□□ -0.77
PTPRF-203ENST00000372407 OR2W3Q7Z3T1 314 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 OR13D1Q8NGV5 346 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 PINX1Q96BK5 328 aaKnown RBP10.24□□□□□ -0.77
PTPRF-203ENST00000372407 MAP6Q96JE9 813 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 MTCH1Q9NZJ7 389 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 CST4P01036 141 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 ERHP84090 104 aaKnown RBP10.24□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF117Q03924 483 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 FXNQ16595 210 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF547Q8IVP9 402 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 C17orf47Q8NEP4 570 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 EXTL1Q92935 676 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 TNFSF11O14788 317 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 OR5G3P0C626 314 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 IL9P15248 144 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 NME1P15531 152 aaKnown RBP10.24□□□□□ -0.77
PTPRF-203ENST00000372407 MVDP53602 400 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 PMP22Q01453 160 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 RTL8BQ17RB0 113 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 NCR3LG1Q68D85 454 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF574Q6ZN55 896 aaPredicted RBP10.24□□□□□ -0.77
PTPRF-203ENST00000372407 VN1R4Q7Z5H5 301 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 DUSP18Q8NEJ0 188 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 OR52N4Q8NGI2 321 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 OR1F12Q8NHA8 337 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 ANGPTL6Q8NI99 470 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 ROBO4Q8WZ75 1007 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 ZC3HAV1LQ96H79 300 aaKnown RBP10.24□□□□□ -0.77
PTPRF-203ENST00000372407 ALG1L2C9J202 215 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 TO15178 435 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 CISD3P0C7P0 127 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 KISS1Q15726 138 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 SLC38A6Q8IZM9 456 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 SPICQ8N5J4 248 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 OR8D4Q8NGM9 314 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 TMEM18Q96B42 140 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF764Q96H86 408 aaPredicted RBP10.24□□□□□ -0.77
PTPRF-203ENST00000372407 SIRT3Q9NTG7 399 aaPredicted RBP10.24□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF391Q9UJN7 358 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 LOXL2Q9Y4K0 774 aa10.24□□□□□ -0.77
PTPRF-203ENST00000372407 CEP250Q9BV73 2442 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 A0A1W2PPQ1 181 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 G3V3Q6 166 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 RNASEK-C17orf49H0YIS7 233 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 CDC42EP2O14613 210 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 CYTIPO60759 359 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 YIF1AO95070 293 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 HIST1H1DP16402 221 aaKnown RBP10.23□□□□□ -0.77
PTPRF-203ENST00000372407 NTF3P20783 257 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 CD96P40200 585 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 CSN1S1P47710 185 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 PRICKLE4Q2TBC4 344 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 TMEM215Q68D42 235 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 ETFBKMTQ8IXQ9 262 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 MUC20Q8N307 709 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-203ENST00000372407 NECAP1Q8NC96 275 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 TIMD4Q96H15 378 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 CCDC74BQ96LY2 380 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF251Q9BRH9 671 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 PCED1AQ9H1Q7 454 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF586Q9NXT0 402 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 PROCRQ9UNN8 238 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 TMED3Q9Y3Q3 217 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 TRBV5-3A0A0A0MS03 114 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 LINC01387J3KSC0 135 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 SPRY1O43609 319 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-203ENST00000372407 SLC25A4P12235 298 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 TMEM11P17152 192 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 CDKN2AP42771 156 aaKnown RBP10.23□□□□□ -0.77
PTPRF-203ENST00000372407 FMODQ06828 376 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 MPPED2Q15777 294 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 SP6Q3SY56 376 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 CDONQ4KMG0 1287 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 PRSS41Q7RTY9 318 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 PRSS42Q7Z5A4 293 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-203ENST00000372407 C12orf57Q99622 126 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 FBXO34Q9NWN3 711 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 TRIP12Q14669 1992 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-203ENST00000372407 H0Y8G0 127 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 PIAS2O75928 621 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 CD160O95971 181 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 FABP9Q0Z7S8 132 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 HLXQ14774 488 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-203ENST00000372407 GSG1Q2KHT4 349 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 GALMQ96C23 342 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 VN1R1Q9GZP7 353 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 C12orf10Q9HB07 376 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 RAB18Q9NP72 206 aa10.23□□□□□ -0.77
PTPRF-203ENST00000372407 DVL1O14640 695 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 CTAG2O75638 210 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 PGA3P0DJD8 388 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 RFC3P40938 356 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms