RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TMEM244Q5VVB8 128 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 CARD17Q5XLA6 110 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 PRSS54Q6PEW0 395 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 GLIPR1L1Q6UWM5 242 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 IL34Q6ZMJ4 242 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 SKA3Q8IX90 412 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 MRPL43Q8N983 215 aaKnown RBP4.78□□□□□ -1.64
ATG4A-204ENST00000372246 TERB2Q8NHR7 220 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 FAM213BQ8TBF2 198 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 NT5CQ8TCD5 201 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 WFIKKN2Q8TEU8 576 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 Q8WTZ3 238 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 TSLPQ969D9 159 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 TOMM40LQ969M1 308 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 ELSPBP1Q96BH3 223 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 NTNG2Q96CW9 530 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 OR2M4Q96R27 311 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 EGLN1Q9GZT9 426 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 SLC26A1Q9H2B4 701 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 NELFAQ9H3P2 528 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 Q9N2J8 555 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF701Q9NV72 531 aaPredicted RBP4.78□□□□□ -1.64
ATG4A-204ENST00000372246 SLC17A4Q9Y2C5 497 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 B3GALT1Q9Y5Z6 326 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 PRRC2CQ9Y520 2896 aaKnown RBP4.78□□□□□ -1.64
ATG4A-204ENST00000372246 RP1P56715 2156 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 KIAA0100Q14667 2235 aaKnown RBP4.78□□□□□ -1.64
ATG4A-204ENST00000372246 MYO7BQ6PIF6 2116 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 IGHV3-20A0A0C4DH32 117 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 PRR19A6NJB7 356 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF726A6NNF4 738 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 C2orf74A8MZ97 194 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 H3BML4 177 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 WRBO00258 174 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 MFNGO00587 321 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 MSTNO14793 375 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 OR2C1O95371 312 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 UTS2O95399 124 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 SFT2D2O95562 160 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 TTRP02766 147 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 TRGC2P03986 189 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 SLC35E2P0CK97 266 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 GIMD1P0DJR0 217 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 CTNNB1P35222 781 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 OPRM1P35372 400 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 APLNRP35414 380 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 SNCAP37840 140 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 GLP1RP43220 463 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 OR1D4P47884 311 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 DVL1P1P54792 670 aaPredicted RBP4.78□□□□□ -1.64
ATG4A-204ENST00000372246 RAB2AP61019 212 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 QRFPP83859 136 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 ARFRP1Q13795 201 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF141Q15928 474 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 PRSS8Q16651 343 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM128Q5BJH2 165 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 SLC18B1Q6NT16 456 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 LPCAT3Q6P1A2 487 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 FAM180AQ6UWF9 173 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 ZFP62Q8NB50 900 aaPredicted RBP4.78□□□□□ -1.64
ATG4A-204ENST00000372246 POC1AQ8NBT0 407 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 C15orf40Q8WUR7 153 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 TCTEX1D2Q8WW35 142 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 EDAQ92838 391 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 MMABQ96EY8 250 aaPredicted RBP4.78□□□□□ -1.64
ATG4A-204ENST00000372246 LMF2Q9BU23 707 aaKnown RBP4.78□□□□□ -1.64
ATG4A-204ENST00000372246 HDAC8Q9BY41 377 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 LPAR5Q9H1C0 372 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 ELL3Q9HB65 397 aaPredicted RBP4.78□□□□□ -1.64
ATG4A-204ENST00000372246 EHFQ9NZC4 300 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 WNT16Q9UBV4 365 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 HSF4Q9ULV5 492 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 HHLA2Q9UM44 414 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 GPR132Q9UNW8 380 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 ARHGAP21Q5T5U3 1957 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 TRBV6-7A0A0A0MS04 114 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF729A6NN14 1252 aaPredicted RBP4.77□□□□□ -1.65
ATG4A-204ENST00000372246 C17orf105B2RV13 164 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 K7EPK0 472 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 CNOT4O95628 575 aaKnown RBP4.77□□□□□ -1.65
ATG4A-204ENST00000372246 CLPSP04118 112 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 MELTFP08582 738 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 FOLR2P14207 255 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 MMP9P14780 707 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 AMY2BP19961 511 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 THBS4P35443 961 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 GPR3P46089 330 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 CAMLGP49069 296 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 SULT1A2P50226 295 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 SNU13P55769 128 aaKnown RBP4.77□□□□□ -1.65
ATG4A-204ENST00000372246 FXYD4P59646 89 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 CSNK2A1P68400 391 aaPredicted RBP4.77□□□□□ -1.65
ATG4A-204ENST00000372246 EGR3Q06889 387 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 RSU1Q15404 277 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 PRTGQ2VWP7 1150 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 PHLDA2Q53GA4 152 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 TMEM268Q5VZI3 342 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 WBP2NLQ6ICG8 309 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 SSX9Q7RTT3 188 aa4.77□□□□□ -1.65
ATG4A-204ENST00000372246 C6orf201Q7Z4U5 140 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms