RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PRR14LQ5THK1 2151 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 ZNF726A6NNF4 738 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 NPIPA2E9PIF3 369 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 NPIPA3F8WFD2 350 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 H7C417 338 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 M0QYG6 137 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 QDPRP09417 244 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 CSF1P09603 554 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 NTF4P34130 210 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 DAP3P51398 398 aaKnown RBP9.38□□□□□ -0.91
TPM3-212ENST00000368533 CLDN15P56746 228 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 GLO1Q04760 184 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 FOXO1Q12778 655 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 GLT8D1Q68CQ7 371 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 DHRS7BQ6IAN0 325 aaPredicted RBP9.38□□□□□ -0.91
TPM3-212ENST00000368533 ANKRD16Q6P6B7 361 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 SEC22AQ96IW7 307 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 RBM24Q9BX46 236 aaKnown RBP9.38□□□□□ -0.91
TPM3-212ENST00000368533 TMPRSS13Q9BYE2 586 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 POTEKPQ9BYX7 375 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 MTFP1Q9UDX5 166 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 PATE4P0C8F1 98 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 LIPCP11150 499 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 ANOS1P23352 680 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 MEOX1P50221 254 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 DLX5P56178 289 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 CARD18P57730 90 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 RAB5BP61020 215 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 PPIAP62937 165 aaKnown RBP9.38□□□□□ -0.91
TPM3-212ENST00000368533 MOB3CQ70IA8 216 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 OR6K3Q8NGY3 331 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 OR10D3Q8NH80 312 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 C11orf40Q8WZ69 217 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 C14orf79Q96F83 325 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 FER1L6-AS2Q96M78 137 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 ALKBH3Q96Q83 286 aaPredicted RBP9.38□□□□□ -0.91
TPM3-212ENST00000368533 KCNK17Q96T54 332 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 TTTY12Q9BZ98 90 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 ZNF629Q9UEG4 869 aaPredicted RBP9.38□□□□□ -0.91
TPM3-212ENST00000368533 KLK13Q9UKR3 277 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 ATRXP46100 2492 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 TRBV5-7A0A0A0MS05 114 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 LOC100289279A0A1B0GTE1 492 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 C5orf52A6NGY3 159 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 HMSDA8MTL9 139 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 AKAIN1P0CW23 69 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 MUC1P15941 1255 aaPredicted RBP9.37□□□□□ -0.91
TPM3-212ENST00000368533 PRKXP51817 358 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 B3GALT5-AS1P59052 145 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 SSTP61278 116 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 DEFA6Q01524 100 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 ECH1Q13011 328 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 SLC25A53Q5H9E4 307 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 OLFML2AQ68BL7 652 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 CHST4Q8NCG5 386 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 OR51A2Q8NGJ7 313 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 RPS4Y2Q8TD47 263 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 ASB17Q8WXJ9 295 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 ISOC2Q96AB3 205 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 TAS2R8Q9NYW2 309 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 LRP12Q9Y561 859 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 CCSO14618 274 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 KLK10O43240 276 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 LRP3O75074 770 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 HTR2CP28335 458 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 NKPD1Q17RQ9 610 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 RNFT1Q5M7Z0 435 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 STEAP1BQ6NZ63 245 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 UNQ6494/PRO21346Q6UXR6 183 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 COMMD2Q86X83 199 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 TMEM251Q8N6I4 163 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 OR2AK2Q8NG84 335 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 RNF128Q8TEB7 428 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 FAM46BQ96A09 425 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 TMEM41AQ96HV5 264 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 CLCC1Q96S66 551 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 MICU1Q9BPX6 476 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 ABI3Q9P2A4 366 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 PCNX1Q96RV3 2341 aa9.37□□□□□ -0.91
TPM3-212ENST00000368533 TMEM269A0A1B0GVZ9 245 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 C1orf196B1AJZ1 125 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 SLC17A2O00624 439 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 RER1O15258 196 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 RAB3DO95716 219 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 AMY2AP04746 511 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 CEACAM1P13688 526 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 SRD5A2P31213 254 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 OR2B8PP59922 312 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 GMFBP60983 142 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 SLC35A1P78382 337 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 ACBD4Q8NC06 268 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 DMBX1Q8NFW5 382 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 OR10H5Q8NGA6 315 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 MCHR2Q969V1 340 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 ZNF552Q9H707 407 aaPredicted RBP9.36□□□□□ -0.91
TPM3-212ENST00000368533 SMG1Q96Q15 3661 aaKnown RBP9.36□□□□□ -0.91
TPM3-212ENST00000368533 TRAV14DV4A0A0A6YYC5 116 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 AQP7P3A6NL99 342 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 COLCA2A8K830 154 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 P2RY10O00398 339 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms