RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 CALHM3Q86XJ0 350 aa7.28□□□□□ -1.24
SSR2-202ENST00000368311 CELF2-AS1Q8N7Q2 184 aa7.28□□□□□ -1.24
SSR2-202ENST00000368311 BHLHE23Q8NDY6 225 aa7.28□□□□□ -1.24
SSR2-202ENST00000368311 NLKQ9UBE8 527 aa7.28□□□□□ -1.24
SSR2-202ENST00000368311 ZNF222Q9UK12 451 aa7.28□□□□□ -1.24
SSR2-202ENST00000368311 GABRPO00591 440 aa7.28□□□□□ -1.24
SSR2-202ENST00000368311 IL1AP01583 271 aa7.28□□□□□ -1.24
SSR2-202ENST00000368311 GAPDHP04406 335 aaKnown RBP7.28□□□□□ -1.24
SSR2-202ENST00000368311 ZNF774Q6NX45 483 aa7.28□□□□□ -1.24
SSR2-202ENST00000368311 MOGAT3Q86VF5 341 aa7.28□□□□□ -1.24
SSR2-202ENST00000368311 APCDD1LQ8NCL9 501 aa7.28□□□□□ -1.24
SSR2-202ENST00000368311 IGKV1-8A0A0C4DH67 115 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 MED19A0JLT2 244 aaPredicted RBP7.27□□□□□ -1.25
SSR2-202ENST00000368311 SMAD9O15198 467 aaKnown RBP7.27□□□□□ -1.25
SSR2-202ENST00000368311 TNFRSF1BP20333 461 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 ZBTB25P24278 435 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 ERP29P30040 261 aaKnown RBP7.27□□□□□ -1.25
SSR2-202ENST00000368311 HBG1P69891 147 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 HBG2P69892 147 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 CLEC12BQ2HXU8 276 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 SAMD13Q5VXD3 122 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 H2BFWTQ7Z2G1 175 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 DYNLRB2Q8TF09 96 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 DUS3LQ96G46 650 aaKnown RBP7.27□□□□□ -1.25
SSR2-202ENST00000368311 SEBOXQ9HB31 216 aaPredicted RBP7.27□□□□□ -1.25
SSR2-202ENST00000368311 EXTL2Q9UBQ6 330 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 TRAV18A0A075B6X5 111 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 TMEM200CA6NKL6 621 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 TIMM23O14925 209 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 SHOXO15266 292 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 CDC14BO60729 498 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 GPX5O75715 221 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 ZNF728P0DKX0 622 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 GALP22466 123 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 ABLIM2Q6H8Q1 611 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 LINC01560Q8TB33 94 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 GATA6Q92908 595 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 SLC25A28Q96A46 364 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 C12orf43Q96C57 262 aaKnown RBP7.27□□□□□ -1.25
SSR2-202ENST00000368311 POM121L2Q96KW2 1035 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 ZNF446Q9NWS9 450 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 RNF114Q9Y508 228 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 TRPM6Q9BX84 2022 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 PTP4A3O75365 173 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 AZGP1P25311 298 aaKnown RBP7.27□□□□□ -1.25
SSR2-202ENST00000368311 CSN1S1P47710 185 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 PPT1P50897 306 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 OGFRL1Q5TC84 451 aaPredicted RBP7.27□□□□□ -1.25
SSR2-202ENST00000368311 ZNF787Q6DD87 383 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 LAMTOR1Q6IAA8 161 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 GGHQ92820 318 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 SNX22Q96L94 193 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 ZNF714Q96N38 554 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 TSPAN32Q96QS1 320 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 MCRIP2Q9BUT9 160 aaKnown RBP7.27□□□□□ -1.25
SSR2-202ENST00000368311 GFOD1Q9NXC2 390 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 RALYQ9UKM9 306 aaKnown RBP7.27□□□□□ -1.25
SSR2-202ENST00000368311 AUP1Q9Y679 476 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 MGST3O14880 152 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 TXNDC12O95881 172 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 SRD5A1P18405 259 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 RAB6AP20340 208 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 SFTPA2Q8IWL1 248 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 OR2T6Q8NHC8 308 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 TCTEX1D2Q8WW35 142 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 TMEM106AQ96A25 262 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 SSBP3Q9BWW4 388 aaPredicted RBP7.27□□□□□ -1.25
SSR2-202ENST00000368311 IL20Q9NYY1 176 aa7.27□□□□□ -1.25
SSR2-202ENST00000368311 PLEKHB1Q9UF11 243 aaPredicted RBP7.27□□□□□ -1.25
SSR2-202ENST00000368311 A0A0U1RQV5 110 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 LILRA1O75019 489 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 WISP3O95389 354 aaPredicted RBP7.26□□□□□ -1.25
SSR2-202ENST00000368311 SCGB1D2O95969 90 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 ZNF26P17031 533 aaPredicted RBP7.26□□□□□ -1.25
SSR2-202ENST00000368311 CA6P23280 308 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 MEF2CQ06413 473 aaPredicted RBP7.26□□□□□ -1.25
SSR2-202ENST00000368311 HNRNPA0Q13151 305 aaKnown RBP7.26□□□□□ -1.25
SSR2-202ENST00000368311 CDK5R2Q13319 367 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 ELP2Q6IA86 826 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 LRRC28Q86X40 367 aaPredicted RBP7.26□□□□□ -1.25
SSR2-202ENST00000368311 LRRC75A-AS1Q8N1F1 130 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 SLC38A9Q8NBW4 561 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 ZNF75AQ96N20 296 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 SLA2Q9H6Q3 261 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 MMP26Q9NRE1 261 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 HAO2Q9NYQ3 351 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 SIGLEC7Q9Y286 467 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 E9PQ18 207 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 KNG1P01042 644 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 OR10A3P58181 314 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 ZNF404Q494X3 552 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 SLC25A30Q5SVS4 291 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 ST6GALNAC5Q9BVH7 336 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 TTTY10Q9BZA0 68 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 NTNG1Q9Y2I2 539 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 TM4SF5O14894 197 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 ZG16O60844 167 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 PRH1P02810 166 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 FGF2P09038 288 aa7.26□□□□□ -1.25
SSR2-202ENST00000368311 GABRA4P48169 554 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms