RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 ECI1P42126 302 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 YAP1P46937 504 aaKnown RBP6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 CENPAP49450 140 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 DYNLT3P51808 116 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 RPL23AP62750 156 aaKnown RBP6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 SNCBQ16143 134 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 ABCA11PQ4W5N1 156 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 LRRC23Q53EV4 343 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZNF329Q86UD4 541 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 KIRREL3Q8IZU9 778 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 LINC00471Q8N535 108 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 DPP10Q8N608 796 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR4M1Q8NGD0 313 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR4X2Q8NGF9 303 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR8S1Q8NH09 359 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 FAM81AQ8TBF8 368 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 BCAS4Q8TDM0 211 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZNF799Q96GE5 643 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 MED30Q96HR3 178 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 RAX2Q96IS3 184 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 MCRIP2Q9BUT9 160 aaKnown RBP6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 ROPN1BQ9BZX4 212 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 DNTTIP1Q9H147 329 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 HEXA-AS1Q9H8Q6 139 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 SP140LQ9H930 580 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 ROPN1Q9HAT0 212 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 MRPL22Q9NWU5 206 aaKnown RBP6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 B9D1Q9UPM9 204 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 CORO2BQ9UQ03 480 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 NOP16Q9Y3C1 178 aaKnown RBP6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 RHBDD3Q9Y3P4 386 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 A0A087WUU8 490 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR2AT4A6NND4 320 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 ALDOBP05062 364 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 ARG1P05089 322 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 PSG2P11465 335 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 DCTDP32321 178 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 GRK5P34947 590 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 GABRA2P47869 451 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 ENTPD1P49961 510 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 SLC25A1P53007 311 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 LGALS4P56470 323 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 FAM3AP98173 230 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZBED5Q49AG3 693 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZNF626Q68DY1 528 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 EPGNQ6UW88 154 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 CD177Q8N6Q3 437 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 TMEM185AQ8NFB2 350 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR10A6Q8NH74 314 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 SLC26A7Q8TE54 656 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZNRF4Q8WWF5 429 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 SPSB4Q96A44 273 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 MALSU1Q96EH3 234 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 CGREF1Q99674 301 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 TMEM109Q9BVC6 243 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 POLR2J2Q9GZM3 115 aaKnown RBP6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 POLR2J3Q9H1A7 115 aaKnown RBP6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 FN3KQ9H479 309 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 NRIP3Q9NQ35 241 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 ABCB10Q9NRK6 738 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 THAP1Q9NVV9 213 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZNF319Q9P2F9 582 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 HILPDAQ9Y5L2 63 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 N6AMT1Q9Y5N5 214 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 IER3IP1Q9Y5U9 82 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 HECTD4Q9Y4D8 3996 aa6.7□□□□□ -1.34
HMGB1P39-201ENST00000366304 FRMD6-AS1P0C7T7 363 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 MYCNOSP40205 109 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 NAA10P41227 235 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 TPTEP56180 551 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 RPL31P62899 125 aaKnown RBP6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 VMACQ2NL98 169 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 DEFB136Q30KP8 78 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 KRT71Q3SY84 523 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 AGKQ53H12 422 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 TMPRSS11FQ6ZWK6 438 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 SLC16A9Q7RTY1 509 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 DHDDSQ86SQ9 333 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR11H6Q8NGC7 330 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 SGK3Q96BR1 496 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 SDSLQ96GA7 329 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 NOL4LQ96MY1 436 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 EBF4Q9BQW3 602 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 VNN3Q9NY84 501 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 NLKQ9UBE8 527 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 PITPNC1Q9UKF7 332 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 SIGLEC7Q9Y286 467 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 DNAH10Q8IVF4 4471 aa6.69□□□□□ -1.34
HMGB1P39-201ENST00000366304 hCG_38984A0A1B0GV85 526 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 ANKRD30BLA7E2S9 258 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 C17orf98A8MV24 154 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 RGS16O15492 202 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 GLCEO94923 617 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 TXNDC12O95881 172 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZNF823P16415 610 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 PAICSP22234 425 aaKnown RBP6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 PRKXP51817 358 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 SPIBQ01892 262 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 SLC34A1Q06495 639 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 ST3GAL3Q11203 375 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms