RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 NDUFS7O75251 213 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 MTRF1O75570 445 aaKnown RBP9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 ALX3O95076 343 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 EIF4EP06730 217 aaKnown RBP9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 DBHP09172 617 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 ZNF20P17024 532 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 CDKN1AP38936 164 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 RANBP1P43487 201 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 KIR2DL2P43627 348 aaPredicted RBP9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 TGFBR3Q03167 851 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 UBE2NLQ5JXB2 153 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 FAM166AQ6J272 317 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 BAIAP2L2Q6UXY1 529 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 NAA40Q86UY6 237 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 COMMD2Q86X83 199 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 LYPD6Q86Y78 171 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 CDH26Q8IXH8 852 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 CCDC36Q8IYA8 594 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 DNAAF1Q8NEP3 725 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 OR5D14Q8NGL3 314 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 LILRB1Q8NHL6 650 aaPredicted RBP9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 LGALS14Q8TCE9 139 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 CHPT1Q8WUD6 406 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 SLC7A6Q92536 515 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 AKAP1Q92667 903 aaKnown RBP eCLIP9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 ITFG2Q969R8 447 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 PLPPR2Q96GM1 343 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 LYZL4Q96KX0 146 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 OCSTAMPQ9BR26 566 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 ABCG5Q9H222 651 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 RGCCQ9H4X1 137 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 LIN7BQ9HAP6 207 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 ABCB10Q9NRK6 738 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 PLSCR4Q9NRQ2 329 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 EXTL2Q9UBQ6 330 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 A0A096LPE4 126 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 A0A0B4J203 849 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 A0A1W2PPZ6 126 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 LMX1BO60663 402 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 DHRS3O75911 302 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 TPPPO94811 219 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 ALDOBP05062 364 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 ERCC1P07992 297 aaPredicted RBP9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 RAB3AP20336 220 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 ANOS1P23352 680 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 BDKRB2P30411 391 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 THBS4P35443 961 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 NR4A2P43354 598 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 CAPZA1P52907 286 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 IL18Q14116 193 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 RAB11BQ15907 218 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 C1orf100Q5SVJ3 147 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 SFRP5Q5T4F7 317 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 C9orf135Q5VTT2 229 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 STEAP3Q658P3 488 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 PYHIN1Q6K0P9 492 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 COLCA1Q6ZS62 124 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 Q6ZT83 130 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 CPEB3Q8NE35 698 aaKnown RBP9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 C1orf162Q8NEQ5 155 aaPredicted RBP9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 OR1M1Q8NGA1 313 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 OR4M1Q8NGD0 313 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 OR6M1Q8NGM8 313 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 RAB40AQ8WXH6 277 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 SGK3Q96BR1 496 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 FAM71F1Q96KD3 344 aaPredicted RBP9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 UQCC2Q9BRT2 126 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 C1QTNF5Q9BXJ0 243 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 ESRP2Q9H6T0 727 aaKnown RBP9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 TMEM138Q9NPI0 162 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 B3GNT2Q9NY97 397 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 OR5V1Q9UGF6 321 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 N6AMT1Q9Y5N5 214 aa9.65□□□□□ -0.86
CSNK1E-202ENST00000366216 ARFGEF3Q5TH69 2177 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 IGHV4-30-2A0A087WSY4 118 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 C5orf63A6NC05 138 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 HLA-HP01893 362 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 LCATP04180 440 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 SOD3P08294 240 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 DANCRP0C864 163 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 PPP3CBP16298 524 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 COX5AP20674 150 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 IGHV1-2P23083 117 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 GNALP38405 381 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 PITPNBP48739 271 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 RAB1AP62820 205 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 HGFACQ04756 655 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 PLP2Q04941 152 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 SPOCK1Q08629 439 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 OXA1LQ15070 435 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 SNAI3Q3KNW1 292 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 TBRG1Q3YBR2 411 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 PYDC2Q56P42 97 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 Q6ZNX1 250 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 UTS2BQ765I0 119 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 SNX29P2Q8IUI4 249 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 OR8H2Q8N162 312 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 ZNF610Q8N9Z0 462 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 OR51A2Q8NGJ7 313 aa9.64□□□□□ -0.87
CSNK1E-202ENST00000366216 SETD6Q8TBK2 473 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms