RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 OR52E5Q8NH55 327 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 FAM81AQ8TBF8 368 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 ZNF75AQ96N20 296 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 TGS1Q96RS0 853 aaKnown RBP1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 TMEM185BQ9H7F4 350 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 HEBP1Q9NRV9 189 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 TENM1Q9UKZ4 2725 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 TMEM72A0PK05 275 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 D6RAR5 112 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 SYNGR2O43760 224 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 TDP2O95551 362 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 IGKV1-16P04430 117 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 CTSGP08311 255 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 IFI30P13284 250 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 STOMP27105 288 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 AP1S2P56377 157 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 CARD17Q5XLA6 110 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 WDR82Q6UXN9 313 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 SPNS3Q6ZMD2 512 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 TMPPEQ6ZT21 453 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 EIF4E3Q8N5X7 224 aaKnown RBP1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 ASZ1Q8WWH4 475 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 SNF8Q96H20 258 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 GSDMAQ96QA5 445 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 GPR21Q99679 349 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 TBL1XR1Q9BZK7 514 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 FAM60AQ9NP50 221 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 SPATA31E1Q6ZUB1 1445 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 TMEM131Q92545 1883 aa1.45□□□□□ -2.18
RNU4-28P-201ENST00000364739 MIA3Q5JRA6 1907 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 ELP1O95163 1332 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 A0A0G2JMP0 313 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 A0A0X1KG70 313 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 MPHOSPH10O00566 681 aaKnown RBP1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 BCKDKO14874 412 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 ENTPD6O75354 484 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 CXCR1P25024 350 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 ATP5G2Q06055 141 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 TFDP2Q14188 446 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 HADHQ16836 314 aaKnown RBP1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 TMEM220Q6QAJ8 160 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 ZYG11AQ6WRX3 759 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 UNC93AQ86WB7 457 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 ISG20Q96AZ6 181 aaKnown RBP1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 FAM19A4Q96LR4 140 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 PEBP4Q96S96 227 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 CCNB1IP1Q9NPC3 277 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 HPCAL4Q9UM19 191 aa1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 NDRG2Q9UN36 371 aaKnown RBP1.44□□□□□ -2.18
RNU4-28P-201ENST00000364739 IGHV6-1A0A0B4J1U7 121 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 KBTBD11-OT1A0A1B0GTJ5 212 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 GGTLC3B5MD39 225 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 FCN3O75636 299 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 IFNW1P05000 195 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 KRT16P08779 473 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 CSRP1P21291 193 aaKnown RBP1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 HMOX2P30519 316 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 GRB2P62993 217 aaKnown RBP1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 DEFB103AP81534 67 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 STEAP4Q687X5 459 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 TWF2Q6IBS0 349 aaKnown RBP1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 TMEM144Q7Z5S9 345 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 SCD5Q86SK9 330 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 ITPRIPQ8IWB1 547 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 JAGN1Q8N5M9 183 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 OR2M7Q8NG81 312 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 OR4C5Q8NGB2 326 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 SFXN5Q8TD22 340 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 RDH12Q96NR8 316 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 SCGB3A2Q96PL1 93 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 NAPGQ99747 312 aaPredicted RBP1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 PPIL1Q9Y3C6 166 aa1.43□□□□□ -2.18
RNU4-28P-201ENST00000364739 A0A1W2PNM2 257 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 HLA-HP01893 362 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 ERCC1P07992 297 aaPredicted RBP1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 ZNF708P17019 499 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 GNRHRP30968 328 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 PRSS3P35030 304 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 TUFMP49411 452 aaKnown RBP1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 OR2B8PP59922 312 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 RPS15P62841 145 aaKnown RBP1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 GABRA6Q16445 453 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 RWDD4Q6NW29 188 aaKnown RBP1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 SLC30A8Q8IWU4 369 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 GABRG1Q8N1C3 465 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 ZCCHC24Q8N2G6 241 aaKnown RBP1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 FAM57AQ8TBR7 257 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 OR5P3Q8WZ94 311 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 YIPF5Q969M3 257 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 FAM192AQ9GZU8 254 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 GEMIN7Q9H840 131 aaKnown RBP1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 CYP3A43Q9HB55 503 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 TREX1Q9NSU2 369 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 TMEM38BQ9NVV0 291 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 GCNT4Q9P109 453 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 ENPP4Q9Y6X5 453 aa1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 BRD4O60885 1362 aaPredicted RBP1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 HELZ2Q9BYK8 2649 aaKnown RBP1.42□□□□□ -2.18
RNU4-28P-201ENST00000364739 LINC01619G3V211 115 aa1.41□□□□□ -2.18
RNU4-28P-201ENST00000364739 PRB1P04280 392 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms