RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 RSPO4Q2I0M5 234 aaPredicted RBP7.53□□□□□ -1.2
RFX3-202ENST00000358730 C10orf128Q5T292 105 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 ZNF585AQ6P3V2 769 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 OR51F2Q8NH61 342 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 PP6455Q8WZ26 134 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 NABP1Q96AH0 204 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 ZNF799Q96GE5 643 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 OR10C1Q96KK4 312 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 NECAB3Q96P71 396 aaPredicted RBP7.53□□□□□ -1.2
RFX3-202ENST00000358730 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.53□□□□□ -1.2
RFX3-202ENST00000358730 PLEK2Q9NYT0 353 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 WNT16Q9UBV4 365 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 DKKL1Q9UK85 242 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 V9GYS6 101 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 KIAA1549Q9HCM3 1950 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 FGF16O43320 207 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 ACTL6AO96019 429 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 HOXB5P09067 269 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 PET100P0DJ07 73 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 NAT2P11245 290 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 GABRR1P24046 479 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 ALDH3B1P43353 468 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 NAAAQ02083 359 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 EIF3IQ13347 325 aaKnown RBP7.53□□□□□ -1.2
RFX3-202ENST00000358730 RAB32Q13637 225 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 OPN5Q6U736 354 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 DRAM2Q6UX65 266 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 OR9K2Q8NGE7 335 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 SAP25Q8TEE9 199 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 RNF141Q8WVD5 230 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 HAS2Q92819 552 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 TMEM54Q969K7 222 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 ARL11Q969Q4 196 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 ULBP2Q9BZM5 246 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 OR2S2Q9NQN1 319 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 CYTL1Q9NRR1 136 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 GSKIPQ9P0R6 139 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 C14orf166Q9Y224 244 aaKnown RBP7.53□□□□□ -1.2
RFX3-202ENST00000358730 IGHV1-45A0A0A0MS14 117 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 TMEM218A2RU14 115 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 GPR31O00270 319 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 DHHO43323 396 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 EIF1BO60739 113 aaKnown RBP7.53□□□□□ -1.2
RFX3-202ENST00000358730 ATG12O94817 140 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 LIFP15018 202 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 ZNF169Q14929 603 aaPredicted RBP7.53□□□□□ -1.2
RFX3-202ENST00000358730 CCDC157Q569K6 752 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 C6orf201Q7Z4U5 140 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 TMEM123Q8N131 208 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 CLRN3Q8NCR9 226 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 AIFM2Q9BRQ8 373 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 TM2D1Q9BX74 207 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 WDR54Q9H977 334 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 NXT1Q9UKK6 140 aaKnown RBP7.53□□□□□ -1.2
RFX3-202ENST00000358730 PTRH2Q9Y3E5 179 aaKnown RBP7.53□□□□□ -1.2
RFX3-202ENST00000358730 ABCD4O14678 606 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 MTRF1O75570 445 aaKnown RBP7.52□□□□□ -1.21
RFX3-202ENST00000358730 SFTPBP07988 381 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 CYC1P08574 325 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 CD63P08962 238 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 RPS2P15880 293 aaKnown RBP7.52□□□□□ -1.21
RFX3-202ENST00000358730 SNAI3Q3KNW1 292 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 PLEKHN1Q494U1 663 aaPredicted RBP7.52□□□□□ -1.21
RFX3-202ENST00000358730 SLC16A14Q7RTX9 510 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 FOXRED2Q8IWF2 684 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 MAML2Q8IZL2 1156 aaPredicted RBP7.52□□□□□ -1.21
RFX3-202ENST00000358730 POC1AQ8NBT0 407 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 EMG1Q92979 244 aaKnown RBP7.52□□□□□ -1.21
RFX3-202ENST00000358730 NAT6Q93015 286 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 SPTSSAQ969W0 71 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 C2orf50Q96LR7 162 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 AQP10Q96PS8 301 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 ACKR4Q9NPB9 350 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 TMEM100Q9NV29 134 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 MCTS1Q9ULC4 181 aaKnown RBP7.52□□□□□ -1.21
RFX3-202ENST00000358730 IGKV1D-8A0A087WSZ0 117 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 LOC102723996A0A087X1L8 192 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 ZNF705EA8MWA4 302 aaPredicted RBP7.52□□□□□ -1.21
RFX3-202ENST00000358730 TNFSF11O14788 317 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 VAMP5O95183 116 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 SERPINA5P05154 406 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 UMODP07911 640 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 LYL1P12980 280 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 ADCYAP1P18509 176 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 OTX1P32242 354 aaPredicted RBP7.52□□□□□ -1.21
RFX3-202ENST00000358730 PTGER4P35408 488 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 ZNF84P51523 738 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 DSCR4P56555 118 aaPredicted RBP7.52□□□□□ -1.21
RFX3-202ENST00000358730 CHAF1BQ13112 559 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 ARL6IP1Q15041 203 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 RSPO1Q2MKA7 263 aaPredicted RBP7.52□□□□□ -1.21
RFX3-202ENST00000358730 HLA-BQ31612 363 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 PDSS1Q5T2R2 415 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 FOXL2NBQ6ZUU3 175 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 SVBPQ8N300 66 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 RHBDD1Q8TEB9 315 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 MR1Q95460 341 aa7.52□□□□□ -1.21
RFX3-202ENST00000358730 HDHD3Q9BSH5 251 aaPredicted RBP7.52□□□□□ -1.21
RFX3-202ENST00000358730 NAA11Q9BSU3 229 aaPredicted RBP7.52□□□□□ -1.21
RFX3-202ENST00000358730 GPR173Q9NS66 373 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms