RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 GPR34Q9UPC5 381 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ANKRD30BLA7E2S9 258 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ARPC3O15145 178 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 CNN1P51911 297 aaKnown RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ERVFRD-1P60508 538 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 PBX4Q9BYU1 374 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 IL21Q9HBE4 155 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 FOCADQ5VW36 1801 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 TRBV5-3A0A0A0MS03 114 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 A0A0B4J2E0 115 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 A0A1B0GX12 115 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 SEMG1P04279 462 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 UBE2G1P62253 170 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 PHOSPHO2Q8TCD6 241 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 TGIF2-C20orf24A0A0A6YYL0 155 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ZBTB42B2RXF5 422 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 CST5P28325 142 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 OTX2P32243 289 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 LPAR6P43657 344 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 DCAF7P61962 342 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 WDR74Q6RFH5 385 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 SLC35E3Q7Z769 313 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 SPHK2Q9NRA0 654 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 RBPJLQ9UBG7 517 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 CAMTA1Q9Y6Y1 1673 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 ARFGEF1Q9Y6D6 1849 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 TCRBV21S2A2A0A5A6 115 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF264O43296 627 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 FZD6O60353 706 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 ZFPL1O95159 310 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 MYOGP15173 224 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 MDKP21741 143 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-203ENST00000358544 COX19Q49B96 90 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 ANGPTL5Q86XS5 388 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 OR4N2Q8NGD1 307 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 OR10AD1Q8NGE0 317 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 PAAF1Q9BRP4 392 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 C16orf70Q9BSU1 422 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 DNAJC4Q9NNZ3 241 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 HSD17B6O14756 317 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 PLPP2O43688 288 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 HIST1H1DP16402 221 aaKnown RBP5.47□□□□□ -1.53
VPS13B-203ENST00000358544 GZMMP51124 257 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 TMEM176BQ3YBM2 270 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF740Q8NDX6 193 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 ATG101Q9BSB4 218 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 NXF5Q9H1B4 397 aaKnown RBP5.47□□□□□ -1.53
VPS13B-203ENST00000358544 ERVS71-1P61550 626 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 GAMTQ14353 236 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 KIR2DS3Q14952 304 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 SMIM12Q96EX1 92 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 EPHX3Q9H6B9 360 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 GABRQQ9UN88 632 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 NEU3Q9UQ49 428 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 KCNK7Q9Y2U2 307 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 KCNE1BA0A087WTH5 132 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 TRBV5-4A0A0C4DH59 114 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 SLC35E2P0CK97 266 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 C21orf58P58505 322 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 DLX2Q07687 328 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-203ENST00000358544 MFAP5Q13361 173 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 LAIR2Q6ISS4 152 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 DMBX1Q8NFW5 382 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 RBM24Q9BX46 236 aaKnown RBP5.47□□□□□ -1.53
VPS13B-203ENST00000358544 MSL2Q9HCI7 577 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 LIN7CQ9NUP9 197 aaKnown RBP5.47□□□□□ -1.53
VPS13B-203ENST00000358544 PLXND1Q9Y4D7 1925 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 DVL1O14640 695 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 DEFB110Q30KQ9 67 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 SPATA45Q537H7 98 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 RNF165Q6ZSG1 346 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 DIO2Q92813 273 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 SLC5A6Q9Y289 635 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 COA3Q9Y2R0 106 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-203ENST00000358544 TNFRSF10CO14798 259 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 MT-ATP6P00846 226 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 DBHP09172 617 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 INSM2Q96T92 566 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-203ENST00000358544 PLEK2Q9NYT0 353 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 KIAA1456Q9P272 454 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 FAM24AA6NFZ4 105 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 HCRTR1O43613 425 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 TUSC2O75896 110 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 TTRP02766 147 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 CTSDP07339 412 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-203ENST00000358544 RPS21P63220 83 aaKnown RBP5.47□□□□□ -1.53
VPS13B-203ENST00000358544 OR2J2O76002 312 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 APBB3O95704 486 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 SAPCD1Q5SSQ6 148 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 DMRTA1Q5VZB9 504 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 SLC25A42Q86VD7 318 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 OR5AU1Q8NGC0 362 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 IGSF21Q96ID5 467 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 OR8B4Q96RC9 309 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 ALKBH7Q9BT30 221 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-203ENST00000358544 CALHM2Q9HA72 323 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 PPOXP50336 477 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 PAFAH1B2P68402 229 aa5.47□□□□□ -1.53
VPS13B-203ENST00000358544 ASTLQ6HA08 431 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-203ENST00000358544 SPNS3Q6ZMD2 512 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms