RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 CYSLTR2Q9NS75 346 aa8.81□□□□□ -1
CHD3-202ENST00000358181 TRIP6Q15654 476 aaKnown RBP8.8□□□□□ -1
CHD3-202ENST00000358181 SLC25A26Q70HW3 274 aa8.8□□□□□ -1
CHD3-202ENST00000358181 SLAMF6Q96DU3 332 aa8.8□□□□□ -1
CHD3-202ENST00000358181 KTI12Q96EK9 354 aaPredicted RBP8.8□□□□□ -1
CHD3-202ENST00000358181 SEC22CQ9BRL7 303 aa8.8□□□□□ -1
CHD3-202ENST00000358181 LPAR5Q9H1C0 372 aa8.8□□□□□ -1
CHD3-202ENST00000358181 NAA60Q9H7X0 242 aa8.8□□□□□ -1
CHD3-202ENST00000358181 SYT5O00445 386 aa8.8□□□□□ -1
CHD3-202ENST00000358181 GASTP01350 101 aa8.8□□□□□ -1
CHD3-202ENST00000358181 RAB40ALP0C0E4 278 aa8.8□□□□□ -1
CHD3-202ENST00000358181 DLX5P56178 289 aa8.8□□□□□ -1
CHD3-202ENST00000358181 ENDOGQ14249 297 aaKnown RBP8.8□□□□□ -1
CHD3-202ENST00000358181 TM4SF20Q53R12 229 aa8.8□□□□□ -1
CHD3-202ENST00000358181 RAB40AQ8WXH6 277 aa8.8□□□□□ -1
CHD3-202ENST00000358181 ACPTQ9BZG2 426 aa8.8□□□□□ -1
CHD3-202ENST00000358181 MKRN2Q9H000 416 aaKnown RBP8.8□□□□□ -1
CHD3-202ENST00000358181 NME4O00746 187 aa8.8□□□□□ -1
CHD3-202ENST00000358181 TO15178 435 aa8.8□□□□□ -1
CHD3-202ENST00000358181 CST4P01036 141 aa8.8□□□□□ -1
CHD3-202ENST00000358181 BTF3P20290 206 aaKnown RBP8.8□□□□□ -1
CHD3-202ENST00000358181 ZNF154Q13106 437 aa8.8□□□□□ -1
CHD3-202ENST00000358181 PRSS48Q7RTY5 328 aa8.8□□□□□ -1
CHD3-202ENST00000358181 ALKBH3Q96Q83 286 aaPredicted RBP8.8□□□□□ -1
CHD3-202ENST00000358181 SLC25A32Q9H2D1 315 aa8.8□□□□□ -1
CHD3-202ENST00000358181 GSX1Q9H4S2 264 aaPredicted RBP8.8□□□□□ -1
CHD3-202ENST00000358181 THYN1Q9P016 225 aa8.8□□□□□ -1
CHD3-202ENST00000358181 A4GNTQ9UNA3 340 aa8.8□□□□□ -1
CHD3-202ENST00000358181 KIF13AQ9H1H9 1805 aa8.8□□□□□ -1
CHD3-202ENST00000358181 TSPAN13O95857 204 aa8.8□□□□□ -1
CHD3-202ENST00000358181 JUNBP17275 347 aaPredicted RBP8.8□□□□□ -1
CHD3-202ENST00000358181 COX5AP20674 150 aa8.8□□□□□ -1
CHD3-202ENST00000358181 BCL3P20749 454 aa8.8□□□□□ -1
CHD3-202ENST00000358181 RBM45Q8IUH3 476 aaKnown RBP8.8□□□□□ -1
CHD3-202ENST00000358181 OR8I2Q8N0Y5 310 aa8.8□□□□□ -1
CHD3-202ENST00000358181 OPALINQ96PE5 141 aa8.8□□□□□ -1
CHD3-202ENST00000358181 BEX4Q9NWD9 120 aaPredicted RBP8.8□□□□□ -1
CHD3-202ENST00000358181 EVPLQ92817 2033 aa8.8□□□□□ -1
CHD3-202ENST00000358181 UNCXA6NJT0 531 aa8.8□□□□□ -1
CHD3-202ENST00000358181 ZBTB42B2RXF5 422 aa8.8□□□□□ -1
CHD3-202ENST00000358181 SS18L1O75177 396 aaPredicted RBP8.8□□□□□ -1
CHD3-202ENST00000358181 ZNF26P17031 533 aaPredicted RBP8.8□□□□□ -1
CHD3-202ENST00000358181 GNG4P50150 75 aa8.8□□□□□ -1
CHD3-202ENST00000358181 B2MP61769 119 aa8.8□□□□□ -1
CHD3-202ENST00000358181 IHHQ14623 411 aa8.8□□□□□ -1
CHD3-202ENST00000358181 IL11RAQ14626 422 aa8.8□□□□□ -1
CHD3-202ENST00000358181 HLA-BQ31612 363 aa8.8□□□□□ -1
CHD3-202ENST00000358181 SPANXN1Q5VSR9 72 aa8.8□□□□□ -1
CHD3-202ENST00000358181 CLEC9AQ6UXN8 241 aa8.8□□□□□ -1
CHD3-202ENST00000358181 BVESQ8NE79 360 aa8.8□□□□□ -1
CHD3-202ENST00000358181 CLDN23Q96B33 292 aa8.8□□□□□ -1
CHD3-202ENST00000358181 PDLIM7Q9NR12 457 aa8.8□□□□□ -1
CHD3-202ENST00000358181 NAT8BQ9UHF3 227 aa8.8□□□□□ -1
CHD3-202ENST00000358181 UPK1BO75841 260 aa8.8□□□□□ -1
CHD3-202ENST00000358181 APOBEC1P41238 236 aaKnown RBP8.8□□□□□ -1
CHD3-202ENST00000358181 RAB40BQ12829 278 aa8.8□□□□□ -1
CHD3-202ENST00000358181 HTR4Q13639 388 aa8.8□□□□□ -1
CHD3-202ENST00000358181 CMPK2Q5EBM0 449 aa8.8□□□□□ -1
CHD3-202ENST00000358181 CENPVQ7Z7K6 275 aaPredicted RBP8.8□□□□□ -1
CHD3-202ENST00000358181 VRK3Q8IV63 474 aa8.8□□□□□ -1
CHD3-202ENST00000358181 WDR89Q96FK6 387 aaPredicted RBP8.8□□□□□ -1
CHD3-202ENST00000358181 CIB3Q96Q77 187 aaPredicted RBP8.8□□□□□ -1
CHD3-202ENST00000358181 FAAP24Q9BTP7 215 aa8.8□□□□□ -1
CHD3-202ENST00000358181 HILPDAQ9Y5L2 63 aa8.8□□□□□ -1
CHD3-202ENST00000358181 OR5B21A6NL26 309 aa8.79□□□□□ -1
CHD3-202ENST00000358181 K7ESM1 405 aa8.79□□□□□ -1
CHD3-202ENST00000358181 UBL3O95164 117 aa8.79□□□□□ -1
CHD3-202ENST00000358181 TM4SF4P48230 202 aa8.79□□□□□ -1
CHD3-202ENST00000358181 TRMT12Q53H54 448 aaKnown RBP8.79□□□□□ -1
CHD3-202ENST00000358181 FAM162BQ5T6X4 162 aa8.79□□□□□ -1
CHD3-202ENST00000358181 OR51S1Q8NGJ8 323 aa8.79□□□□□ -1
CHD3-202ENST00000358181 LRRC29Q8WV35 223 aa8.79□□□□□ -1
CHD3-202ENST00000358181 TXLNGYQ9BZA5 131 aa8.79□□□□□ -1
CHD3-202ENST00000358181 GPR84Q9NQS5 396 aa8.79□□□□□ -1
CHD3-202ENST00000358181 IDSB3KWA1 339 aa8.79□□□□□ -1
CHD3-202ENST00000358181 SOX8P57073 446 aa8.79□□□□□ -1
CHD3-202ENST00000358181 MRPS10P82664 201 aaKnown RBP8.79□□□□□ -1
CHD3-202ENST00000358181 SOWAHCQ53LP3 525 aaPredicted RBP8.79□□□□□ -1
CHD3-202ENST00000358181 C19orf43Q9BQ61 176 aa8.79□□□□□ -1
CHD3-202ENST00000358181 SLAMF8Q9P0V8 285 aa8.79□□□□□ -1
CHD3-202ENST00000358181 GMPR2Q9P2T1 348 aaKnown RBP8.79□□□□□ -1
CHD3-202ENST00000358181 MOKQ9UQ07 419 aa8.79□□□□□ -1
CHD3-202ENST00000358181 MMP24Q9Y5R2 645 aa8.79□□□□□ -1
CHD3-202ENST00000358181 LINC01565O15544 149 aa8.79□□□□□ -1
CHD3-202ENST00000358181 SOD1P00441 154 aa8.79□□□□□ -1
CHD3-202ENST00000358181 CTSLP07711 333 aa8.79□□□□□ -1
CHD3-202ENST00000358181 MMP15P51511 669 aa8.79□□□□□ -1
CHD3-202ENST00000358181 OR2T2Q6IF00 324 aa8.79□□□□□ -1
CHD3-202ENST00000358181 FAM53AQ6NSI3 398 aaPredicted RBP8.79□□□□□ -1
CHD3-202ENST00000358181 RPUSD3Q6P087 351 aaKnown RBP8.79□□□□□ -1
CHD3-202ENST00000358181 BHLHA15Q7RTS1 189 aaPredicted RBP8.79□□□□□ -1
CHD3-202ENST00000358181 NRG4Q8WWG1 115 aa8.79□□□□□ -1
CHD3-202ENST00000358181 CCL19Q99731 98 aa8.79□□□□□ -1
CHD3-202ENST00000358181 PHF7Q9BWX1 381 aaPredicted RBP8.79□□□□□ -1
CHD3-202ENST00000358181 MBNL1Q9NR56 388 aaKnown RBP8.79□□□□□ -1
CHD3-202ENST00000358181 IGHV4-34P06331 123 aa8.79□□□□□ -1
CHD3-202ENST00000358181 SNRPCP09234 159 aaKnown RBP8.79□□□□□ -1
CHD3-202ENST00000358181 AOAHP28039 575 aa8.79□□□□□ -1
CHD3-202ENST00000358181 CCKARP32238 428 aa8.79□□□□□ -1
CHD3-202ENST00000358181 KLF3P57682 345 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms