RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 GALNTL5Q7Z4T8 443 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 CD163Q86VB7 1156 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 OR4D6Q8NGJ1 314 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 SFT2D1Q8WV19 159 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 SLC25A36Q96CQ1 311 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 SAT2Q96F10 170 aaPredicted RBP11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 UQCC2Q9BRT2 126 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 ABHD6Q9BV23 337 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 EGLN1Q9GZT9 426 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 PTGES2Q9H7Z7 377 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 ZMAT3Q9HA38 289 aaKnown RBP11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 FN3KRPQ9HA64 309 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 G6PC2Q9NQR9 355 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 FBLN5Q9UBX5 448 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 SHPKQ9UHJ6 478 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 DNAJC13O75165 2243 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 TRAV36DV7A0A075B6V5 113 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 METTL21EPA6NDL7 271 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 H0YIZ8 118 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 XKRYO14609 159 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 SMAD9O15198 467 aaKnown RBP11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 MT-ATP6P00846 226 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 SPP1P10451 314 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 POLR2HP52434 150 aaKnown RBP11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 TAS2R31P59538 309 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 SGCBQ16585 318 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 PLPPR5Q32ZL2 321 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 NKAPLQ5M9Q1 402 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 AWAT2Q6E213 333 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 OR10K2Q6IF99 312 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 RHOUQ7L0Q8 258 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 GRINAQ7Z429 371 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 TRAPPC6BQ86SZ2 158 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 HOGA1Q86XE5 327 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 ZSCAN4Q8NAM6 433 aaPredicted RBP11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 ADAD2Q8NCV1 583 aaKnown RBP11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 OR52N5Q8NH56 324 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 TMEM234Q8WY98 164 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 SMIM8Q96KF7 97 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 NRIP2Q9BQI9 281 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 SELENOIQ9C0D9 397 aa11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 RCC2Q9P258 522 aaKnown RBP11.15□□□□□ -0.63
RTFDC1-202ENST00000357348 CACNA1CQ13936 2221 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 OR5H15A6NDH6 313 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 TRAPPC6AO75865 159 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 PLGP00747 810 aaPredicted RBP11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 SPARCP09486 303 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 SERPINF1P36955 418 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 ACKR1Q16570 336 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 YRDCQ86U90 279 aaKnown RBP11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 SULF2Q8IWU5 870 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 POC1BQ8TC44 478 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 RXFP4Q8TDU9 374 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 WNT2BQ93097 391 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 RRNAD1Q96FB5 475 aaKnown RBP11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 ARL5BQ96KC2 179 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 TXNIPQ9H3M7 391 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 LPAR3Q9UBY5 353 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 DKKL1Q9UK85 242 aa11.14□□□□□ -0.63
RTFDC1-202ENST00000357348 FAM25EA8MYX2 175 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 EEF1E1-BLOC1S5C9J1V9 151 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 EFNA2O43921 213 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 SCGNO76038 276 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 HLA-DQA2P01906 255 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 CSN2P05814 226 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 HSD11B1P28845 292 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 SFTPDP35247 375 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 SPOCK1Q08629 439 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 EIF2B1Q14232 305 aaKnown RBP11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 OR7A5Q15622 319 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 PCK2Q16822 640 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 HYAL4Q2M3T9 481 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 RAET1LQ5VY80 246 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 MAMDC2Q7Z304 686 aaPredicted RBP11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 GVQW1Q8N7I0 195 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 FADS6Q8N9I5 356 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 ACBD4Q8NC06 268 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 OR13C3Q8NGS6 347 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 DCUN1D4Q92564 292 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 FAM46BQ96A09 425 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 AQP10Q96PS8 301 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 GAL3ST1Q99999 423 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 RAXQ9Y2V3 346 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 PTPRQQ9UMZ3 2332 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 LOC107986453A0A1B0GWG9 222 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 COLCA2A8K830 154 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 FAM166BA8MTA8 275 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 SLC16A7O60669 478 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 NPIPB7O75200 414 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 OR6A2O95222 327 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 CTLA4P16410 223 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 MSX1P28360 303 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 KCNJ3P48549 501 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 CAV2P51636 162 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 SUMO3P55854 103 aaPredicted RBP11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 PDZK1IP1Q13113 114 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 MFAP5Q13361 173 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 UNC119Q13432 240 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 TMEM244Q5VVB8 128 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms