RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 TRANK1O15050 2925 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 SPAG17Q6Q759 2223 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 WIPF3A6NGB9 483 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 NPIPA5E9PKD4 350 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 LDLRAD4O15165 306 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 HSPA12AO43301 675 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 PTBP3O95758 552 aaKnown RBP7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 IL33O95760 270 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 BGLAPP02818 100 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 VSIG8P0DPA2 414 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 LPAR6P43657 344 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLC37A1P57057 533 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 FBXW4P57775 412 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 RAB1AP62820 205 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 SRSF4Q08170 494 aaKnown RBP7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 UNC119Q13432 240 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF260Q3ZCT1 412 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 C1orf140Q5VVS0 124 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 EIF5AL1Q6IS14 154 aaKnown RBP7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 KLHL24Q6TFL4 600 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 THNSL2Q86YJ6 484 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF664Q8N3J9 261 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 TERB2Q8NHR7 220 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 C8orf44Q96CB5 159 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 ADAT3Q96EY9 351 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 GALNT14Q96FL9 552 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF385AQ96PM9 386 aaKnown RBP7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 RAB33BQ9H082 229 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 S1PR5Q9H228 398 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR51B6Q9H340 312 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 ELL3Q9HB65 397 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 RAB22AQ9UL26 194 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 NPIPA1Q9UND3 350 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 MMP24Q9Y5R2 645 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 A0A087WZY1 265 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 CCDC187A0A096LP49 1063 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 IGLV1-36A0A0B4J1U3 117 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 IGKV1D-43A0A0B4J1Z2 117 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 SHISA8B8ZZ34 492 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 FAM157AC9JC47 383 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 H0YIZ8 118 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 LINC01565O15544 149 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST1H2BKO60814 126 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 LRP3O75074 770 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 DUS4LO95620 317 aaKnown RBP7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST1H2BJP06899 126 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 PGCP20142 388 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST1H2BOP23527 126 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST1H2BBP33778 126 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 CLDN6P56747 220 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST1H2BDP58876 126 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST1H2BCP62807 126 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 MRPS11P82912 194 aaKnown RBP7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 NSDHLQ15738 373 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 SGCBQ16585 318 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST2H2BEQ16778 126 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 TMEM92Q6UXU6 159 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 PEG10Q86TG7 708 aaKnown RBP7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST1H2BHQ93079 126 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 MR1Q95460 341 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 FAM71F1Q96KD3 344 aaPredicted RBP7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR5B2Q96R09 309 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST1H2BNQ99877 126 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST1H2BMQ99879 126 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 TXNIPQ9H3M7 391 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 KIR2DS5A0A0G2JLQ3 304 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 A0A0G2JNG1 304 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 KIR2DS3K7RE56 304 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 NSA2O95478 260 aaKnown RBP7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 SCGB1D2O95969 90 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF20P17024 532 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 MAS1LP35410 378 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF93P35789 620 aaPredicted RBP7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 PPICP45877 212 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR3A2P47893 321 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 KIR2DS5Q14953 304 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 PNLIPRP3Q17RR3 467 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 FNDC7Q5VTL7 733 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 C1orf189Q5VU69 101 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 CARD17Q5XLA6 110 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 GGNBP1Q5YKI7 109 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 ABHD12BQ7Z5M8 362 aaPredicted RBP7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 C5orf24Q7Z6I8 188 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 PAQR4Q8N4S7 273 aaPredicted RBP7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 TMEM104Q8NE00 496 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 M1APQ8TC57 530 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR51E1Q8TCB6 317 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 CD300LFQ8TDQ1 290 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 AQP3Q92482 292 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 CYP8B1Q9UNU6 501 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLC5A6Q9Y289 635 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 MRPS18CQ9Y3D5 142 aaKnown RBP7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 TMED3Q9Y3Q3 217 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 FLVCR1Q9Y5Y0 555 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLCO1B1Q9Y6L6 691 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 MUC22E2RYF6 1773 aaPredicted RBP7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 ASXL3Q9C0F0 2248 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 PCNX3Q9H6A9 2034 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 IGHV3-20A0A0C4DH32 117 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms