RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.71□□□□□ -0.69
SIRPA-201ENST00000356025 SLC7A11Q9UPY5 501 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 SHANK1Q9Y566 2161 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 SPTAN1Q13813 2472 aaKnown RBP10.71□□□□□ -0.69
SIRPA-201ENST00000356025 TMEM200CA6NKL6 621 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 C3orf80F5H4A9 247 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 M0R036 132 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 MED6O75586 246 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 BPNT1O95861 308 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 ZNF260Q3ZCT1 412 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 H3F3CQ6NXT2 135 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 ACOT7LQ6ZUV0 252 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 NUBPLQ8TB37 319 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 FNDC9Q8TBE3 224 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 SECTM1Q8WVN6 248 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 MRPS24Q96EL2 167 aaKnown RBP10.71□□□□□ -0.69
SIRPA-201ENST00000356025 C20orf24Q9BUV8 137 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 SHARPINQ9H0F6 387 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 ZNF700Q9H0M5 742 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 UCK1Q9HA47 277 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 ATPIF1Q9UII2 106 aa10.71□□□□□ -0.69
SIRPA-201ENST00000356025 FREM1Q5H8C1 2179 aa10.71□□□□□ -0.7
SIRPA-201ENST00000356025 A0A0J9YW62 118 aa10.71□□□□□ -0.7
SIRPA-201ENST00000356025 A0A1W2PR80 420 aa10.71□□□□□ -0.7
SIRPA-201ENST00000356025 TRAF3IP2O43734 574 aaPredicted RBP10.71□□□□□ -0.7
SIRPA-201ENST00000356025 GNRHRP30968 328 aa10.71□□□□□ -0.7
SIRPA-201ENST00000356025 EIF1P41567 113 aaKnown RBP10.71□□□□□ -0.7
SIRPA-201ENST00000356025 GUCA2BQ16661 112 aa10.71□□□□□ -0.7
SIRPA-201ENST00000356025 ABHD3Q8WU67 409 aa10.71□□□□□ -0.7
SIRPA-201ENST00000356025 GLS2Q9UI32 602 aa10.71□□□□□ -0.7
SIRPA-201ENST00000356025 CADP27708 2225 aa10.71□□□□□ -0.7
SIRPA-201ENST00000356025 WRBO00258 174 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 S100A9P06702 114 aaKnown RBP10.7□□□□□ -0.7
SIRPA-201ENST00000356025 ZNF32P17041 273 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 RAB6AP20340 208 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 RPS27AP62979 156 aaKnown RBP10.7□□□□□ -0.7
SIRPA-201ENST00000356025 UBA52P62987 128 aaKnown RBP10.7□□□□□ -0.7
SIRPA-201ENST00000356025 KMT5CQ86Y97 462 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 FBXL14Q8N1E6 418 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 SEMA6DQ8NFY4 1073 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 THOC3Q96J01 351 aaKnown RBP10.7□□□□□ -0.7
SIRPA-201ENST00000356025 HIST1H2AAQ96QV6 131 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 REG4Q9BYZ8 158 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 LPAR5Q9H1C0 372 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 B3GAT1Q9P2W7 334 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 KCNIP3Q9Y2W7 256 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 CHRM2P08172 466 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 PGA4P0DJD7 388 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 PGA3P0DJD8 388 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 CLINT1Q14677 625 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 PHYHD1Q5SRE7 291 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 PGAP1Q75T13 922 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 PAQR4Q8N4S7 273 aaPredicted RBP10.7□□□□□ -0.7
SIRPA-201ENST00000356025 STOML3Q8TAV4 291 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 CD300LFQ8TDQ1 290 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 SCGB3A2Q96PL1 93 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 EIF5A2Q9GZV4 153 aaKnown RBP10.7□□□□□ -0.7
SIRPA-201ENST00000356025 WDR13Q9H1Z4 485 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 MEMO1Q9Y316 297 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 ZFHX2Q9C0A1 2572 aaPredicted RBP10.7□□□□□ -0.7
SIRPA-201ENST00000356025 CCDC187A0A096LP49 1063 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 RAD51DO75771 328 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 NR2C1P13056 603 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 TPT1P13693 172 aaKnown RBP10.7□□□□□ -0.7
SIRPA-201ENST00000356025 CASRP41180 1078 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 CLDN15P56746 228 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 FAM76BQ5HYJ3 339 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 PLAC9Q5JTB6 97 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 SPATA46Q5T0L3 261 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 CLEC18BQ6UXF7 455 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 FBXO17Q96EF6 278 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 LHX6Q9UPM6 363 aa10.7□□□□□ -0.7
SIRPA-201ENST00000356025 DENND4AQ7Z401 1863 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 A0A0G2JMM0 328 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 A0A1W2PPB8 328 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 A0A1W2PRS3 328 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 KIR3DP1A8MWS1 328 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 MRPL33O75394 65 aaKnown RBP10.69□□□□□ -0.7
SIRPA-201ENST00000356025 CNOT4O95628 575 aaKnown RBP10.69□□□□□ -0.7
SIRPA-201ENST00000356025 ITGB2P05107 769 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 CPT2P23786 658 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 SNAI3Q3KNW1 292 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 P4HA3Q7Z4N8 544 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 OR5AS1Q8N127 324 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 OR9K2Q8NGE7 335 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 MARVELD3Q96A59 401 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 DNTTIP1Q9H147 329 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 HSPA12AO43301 675 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 AQP8O94778 261 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 CNR1P21554 472 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 GLP1RP43220 463 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 PPT1P50897 306 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 PIGYQ3MUY2 71 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 ABHD17BQ5VST6 288 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 SLC22A25Q6T423 547 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 SLC25A26Q70HW3 274 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 PIGQQ9BRB3 760 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 SLC5A7Q9GZV3 580 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 MAGT1Q9H0U3 335 aa10.69□□□□□ -0.7
SIRPA-201ENST00000356025 METTL9Q9H1A3 318 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms