RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 PCK2Q16822 640 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 WIPI1Q5MNZ9 446 aaPredicted RBP10.99□□□□□ -0.65
COLCA1-201ENST00000355430 OR2G3Q8NGZ4 309 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 RTL8AQ9BWD3 113 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 FN3KRPQ9HA64 309 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 KLHDC2Q9Y2U9 406 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 PRSS44E7EML9 344 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 SOX8P57073 446 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 ARF1P84077 181 aaKnown RBP10.98□□□□□ -0.65
COLCA1-201ENST00000355430 TOMM34Q15785 309 aaPredicted RBP10.98□□□□□ -0.65
COLCA1-201ENST00000355430 CISD2Q8N5K1 135 aaKnown RBP10.98□□□□□ -0.65
COLCA1-201ENST00000355430 OR4D10Q8NGI6 311 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 OR1S2Q8NGQ3 325 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 OTOFQ9HC10 1997 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 UMAD1C9J7I0 102 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 GPR137BO60478 399 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 ZNF883P0CG24 379 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 ABCD3P28288 659 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 CSF2RBP32927 897 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 ACAA2P42765 397 aaKnown RBP10.98□□□□□ -0.65
COLCA1-201ENST00000355430 MRPS34P82930 218 aaKnown RBP10.98□□□□□ -0.65
COLCA1-201ENST00000355430 GUCD1Q96NT3 240 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 WDR54Q9H977 334 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 PCOLCE2Q9UKZ9 415 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 SPINT1O43278 529 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 GUSBP08236 651 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 ZNF266Q14584 549 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 C1QL3Q5VWW1 255 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 ATG4DQ86TL0 474 aaPredicted RBP10.98□□□□□ -0.65
COLCA1-201ENST00000355430 SAP25Q8TEE9 199 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 CHST6Q9GZX3 395 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 ICAM5Q9UMF0 924 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 DTX4Q9Y2E6 619 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 URGCP-MRPS24S4R325 110 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 TRIM77I1YAP6 450 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 SFTA3P0C7M3 94 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 NAT1P18440 290 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 DUSP1P28562 367 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 OR8G1Q15617 311 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 ZNF718Q3SXZ3 478 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 DGAT2L6Q6ZPD8 337 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 OR5M8Q8NGP6 311 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 CNTD2Q9H8S5 307 aa10.98□□□□□ -0.65
COLCA1-201ENST00000355430 ZNF230Q9UIE0 474 aaPredicted RBP10.98□□□□□ -0.65
COLCA1-201ENST00000355430 OR4C45A6NMZ5 311 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 MPC2O95563 127 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 IGKV1D-16P01601 117 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 CYC1P08574 325 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 TLE4Q04727 773 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 HNF4GQ14541 408 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 OR52N4Q8NGI2 321 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 CFDP00746 253 aaPredicted RBP10.97□□□□□ -0.65
COLCA1-201ENST00000355430 VSIG10L2P0DP72 767 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 SRPXP78539 464 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 DPPA2Q7Z7J5 298 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 MRGPREQ86SM8 312 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 NAA40Q86UY6 237 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 HGDQ93099 445 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 ATXN7O15265 892 aaPredicted RBP10.97□□□□□ -0.65
COLCA1-201ENST00000355430 ST8SIA3O43173 380 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 DCAF10Q5QP82 559 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 HIST2H3PS2Q5TEC6 136 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 AADACL3Q5VUY0 350 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 CLDN23Q96B33 292 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 KNL1Q8NG31 2342 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 IGHV3-15A0A0B4J1V0 119 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 A0A0U1RQK1 487 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 SEMA7AO75326 666 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 GGTLC2Q14390 218 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 PLXDC2Q6UX71 529 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 AKR1E2Q96JD6 320 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 OCSTAMPQ9BR26 566 aa10.97□□□□□ -0.65
COLCA1-201ENST00000355430 ATPAF1Q5TC12 328 aaPredicted RBP10.96□□□□□ -0.65
COLCA1-201ENST00000355430 OR51A2Q8NGJ7 313 aa10.96□□□□□ -0.65
COLCA1-201ENST00000355430 MALSU1Q96EH3 234 aa10.96□□□□□ -0.65
COLCA1-201ENST00000355430 RNASEK-C17orf49H0YIS7 233 aa10.96□□□□□ -0.65
COLCA1-201ENST00000355430 OR2B8PP59922 312 aa10.96□□□□□ -0.65
COLCA1-201ENST00000355430 KIAA0141Q14154 515 aaPredicted RBP10.96□□□□□ -0.65
COLCA1-201ENST00000355430 TAF9Q16594 264 aa10.96□□□□□ -0.65
COLCA1-201ENST00000355430 NANPQ8TBE9 248 aa10.96□□□□□ -0.65
COLCA1-201ENST00000355430 LIPHQ8WWY8 451 aa10.96□□□□□ -0.65
COLCA1-201ENST00000355430 ROBO4Q8WZ75 1007 aa10.96□□□□□ -0.65
COLCA1-201ENST00000355430 ARHGAP5-AS1Q96IT6 56 aa10.96□□□□□ -0.65
COLCA1-201ENST00000355430 FAM96BQ9Y3D0 163 aa10.96□□□□□ -0.65
COLCA1-201ENST00000355430 ZNF705GA8MUZ8 300 aaPredicted RBP10.96□□□□□ -0.66
COLCA1-201ENST00000355430 XRCC2O43543 280 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 OR2C1O95371 312 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 RGS7BPQ6MZT1 257 aaPredicted RBP10.96□□□□□ -0.66
COLCA1-201ENST00000355430 ZNF321PQ8N8H1 164 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 TMEM105Q8N8V8 129 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 NOXO1Q8NFA2 376 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 HIPK2Q9H2X6 1198 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 BCO1Q9HAY6 547 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 MMP26Q9NRE1 261 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 M0R135 149 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 HBE1P02100 147 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 F2RL1P55085 397 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 SFT2D1Q8WV19 159 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 ZDHHC16Q969W1 377 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 ZNF799Q96GE5 643 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms