RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 CACFD1Q9UGQ2 172 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 TNFSF18Q9UNG2 199 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 SIGLEC7Q9Y286 467 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 SNRPGP15A8MWD9 76 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 GABARAPH6UMI1 98 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 NKX2-8O15522 239 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 HLA-AP01891 365 aaKnown RBP8.92□□□□□ -0.98
SYNE1-203ENST00000354674 HNF1AP20823 631 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 CYB561P49447 251 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 CARD18P57730 90 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 MST1LQ2TV78 715 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 PLPPR5Q32ZL2 321 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 ARSJQ5FYB0 599 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-203ENST00000354674 BTNL3Q6UXE8 466 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 ACOT7LQ6ZUV0 252 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 MDGA2Q7Z553 956 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 GPR137CQ8N3F9 429 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 DIRC2Q96SL1 478 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 S100A13Q99584 98 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 NOX4Q9NPH5 578 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 MMP26Q9NRE1 261 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 PCNX3Q9H6A9 2034 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 ANKRD20A5PA0PJZ0 165 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 MSGN1A6NI15 193 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 A8MWP6 167 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 RPP14O95059 124 aaKnown RBP8.91□□□□□ -0.98
SYNE1-203ENST00000354674 OR4E1P0C645 316 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 PGA3P0DJD8 388 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 CD34P28906 385 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 RPL4P36578 427 aaKnown RBP8.91□□□□□ -0.98
SYNE1-203ENST00000354674 APOBEC1P41238 236 aaKnown RBP8.91□□□□□ -0.98
SYNE1-203ENST00000354674 FHITP49789 147 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 RPS4XP62701 263 aaKnown RBP8.91□□□□□ -0.98
SYNE1-203ENST00000354674 NKX6-1P78426 367 aaPredicted RBP8.91□□□□□ -0.98
SYNE1-203ENST00000354674 ZNF705AQ6ZN79 300 aaPredicted RBP8.91□□□□□ -0.98
SYNE1-203ENST00000354674 BAP18Q8IXM2 172 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 GALNT16Q8N428 558 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 OR56B1Q8NGI3 324 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 S100A16Q96FQ6 103 aaKnown RBP8.91□□□□□ -0.98
SYNE1-203ENST00000354674 CSAG2Q9Y5P2 127 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 CEP250Q9BV73 2442 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 TMED7-TICAM2A0A0A6YYA0 188 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 CYB5BO43169 146 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 DLEU1O43261 78 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 SCGNO76038 276 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 NEURL1O76050 574 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 DIRAS3O95661 229 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 NUDT14O95848 222 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 MAS1P04201 325 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 CD96P40200 585 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 SLC25A30Q5SVS4 291 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 PRAMEF20Q5VT98 475 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 GGNBP1Q5YKI7 109 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 ZNF813Q6ZN06 617 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 MRGPRX4Q96LA9 322 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 ATG5Q9H1Y0 275 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 RNF24Q9Y225 148 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 TMED7Q9Y3B3 224 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 DOCK10Q96BY6 2186 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 TRAV18A0A075B6X5 111 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 SMCO3A2RU48 225 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 OR5H15A6NDH6 313 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 OR5H1A6NKK0 313 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 ZNF891A8MT65 544 aaPredicted RBP8.91□□□□□ -0.98
SYNE1-203ENST00000354674 EFSO43281 561 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 GMFGO60234 142 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 ITGA5P08648 1049 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 SBK2P0C263 348 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 CXCR1P25024 350 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 GLO1Q04760 184 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 FOXC1Q12948 553 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 ZNF74Q16587 644 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 ABHD17BQ5VST6 288 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 OTPQ5XKR4 325 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 KDM8Q8N371 416 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 RRNAD1Q96FB5 475 aaKnown RBP8.91□□□□□ -0.98
SYNE1-203ENST00000354674 SCNM1Q9BWG6 230 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 OR52D1Q9H346 318 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 AHCTF1Q8WYP5 2266 aa8.91□□□□□ -0.98
SYNE1-203ENST00000354674 TGIF2-C20orf24A0A0A6YYL0 155 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 FAM171A2A8MVW0 826 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 RCBTB2O95199 551 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 BGLAPP02818 100 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 ASAH2BP0C7U1 165 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 TPT1P13693 172 aaKnown RBP8.9□□□□□ -0.98
SYNE1-203ENST00000354674 AKR1C4P17516 323 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 AGTR1P30556 359 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 TAS2R20P59543 309 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 LTBQ06643 244 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 CLEC12BQ2HXU8 276 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 TMEM244Q5VVB8 128 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 SDR9C7Q8NEX9 313 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 OR13C2Q8NGS9 318 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 OR13C9Q8NGT0 318 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 RFKQ969G6 155 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 TIMP4Q99727 224 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 HSF4Q9ULV5 492 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 MSRB2Q9Y3D2 182 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 ASPMQ8IZT6 3477 aa8.9□□□□□ -0.98
SYNE1-203ENST00000354674 TVP23AA6NH52 213 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms