RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SCCPDHQ8NBX0 429 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 MBOAT4Q96T53 435 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 TLNRD1Q9H1K6 362 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 SMPD3Q9NY59 655 aaPredicted RBP13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 SLC7A11Q9UPY5 501 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 KIR2DS1A0A191URI9 304 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 SRRM5B3KS81 715 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 P2RY10O00398 339 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 DLGAP1O14490 977 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 SRSF10O75494 262 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 AVPP01185 164 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 IGLV3-1P01715 115 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 UBCP0CG48 685 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 FAM76BQ5HYJ3 339 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 SSX6Q7RTT6 188 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 WDR86Q86TI4 376 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 FAM90A1Q86YD7 464 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 ZNF573Q86YE8 665 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 SPATA3Q8NHX4 192 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 RPL3LQ92901 407 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 UBE2FQ969M7 185 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 MDFIQ99750 246 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 SLC29A1Q99808 456 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 VCXQ9H320 206 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 FAM118AQ9NWS6 357 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 KAAG1Q9UBP8 84 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 NUP50Q9UKX7 468 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 SLC22A13Q9Y226 551 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 POLDIP2Q9Y2S7 368 aa13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 RPL36Q9Y3U8 105 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-201ENST00000346501 IGHV3OR15-7A0A075B7D8 119 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 GPR37O15354 613 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 NDUFB3O43676 98 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 GATBO75879 557 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 RPSAP08865 295 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 HTR1AP08908 422 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 PPIAL4GP0DN37 164 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 GLRA1P23415 457 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 GMFBP60983 142 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 PAX8Q06710 450 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 ODF4Q2M2E3 257 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 TP53I3Q53FA7 332 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 KLHL22Q53GT1 634 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 LRRC10Q5BKY1 277 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 TMEM244Q5VVB8 128 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 TTC23Q5W5X9 447 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 C1orf229Q6ZS94 237 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 KRT74Q7RTS7 529 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 CATSPERDQ86XM0 798 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 C11orf53Q8IXP5 236 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 HPSE2Q8WWQ2 592 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 RORBQ92753 470 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 PPP1R14AQ96A00 147 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 TMIGD2Q96BF3 282 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 C10orf35Q96D05 121 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 MED30Q96HR3 178 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 MS4A7Q9GZW8 240 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 DNTTIP1Q9H147 329 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 PPP1R3EQ9H7J1 279 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 INPP5EQ9NRR6 644 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 OPN4Q9UHM6 478 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 V9GYS6 101 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 ATRQ13535 2644 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 DOCK11Q5JSL3 2073 aa13.14□□□□□ -0.31
TSPAN4-201ENST00000346501 TRIM77I1YAP6 450 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 SLC16A6O15403 523 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 AKR7A2O43488 359 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 OCM2P0CE71 109 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 OCMP0CE72 109 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 ZNF85Q03923 595 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 ZNF91Q05481 1191 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 MRPL28Q13084 256 aaKnown RBP13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 RCN1Q15293 331 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 LRRC36Q1X8D7 754 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 HAGHLQ6PII5 290 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 USP43Q70EL4 1123 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 EGFL6Q8IUX8 553 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 ENTHD1Q8IYW4 607 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 PACRGLQ8N7B6 248 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 SETD9Q8NE22 299 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 OR14K1Q8NGZ2 314 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 RHOXF1Q8NHV9 184 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 HAVCR2Q8TDQ0 301 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 ST8SIA4Q92187 359 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 OR51I2Q9H344 312 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 NEK6Q9HC98 313 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 ACOXLQ9NUZ1 547 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 RASL12Q9NYN1 266 aa13.13□□□□□ -0.31
TSPAN4-201ENST00000346501 ARHGAP32A7KAX9 2087 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 IRGMA1A4Y4 181 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 ANKRD61A6NGH8 418 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 J3QLW9 94 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 DVL1O14640 695 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 DBTP11182 482 aaKnown RBP13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 ZNF19P17023 458 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 EGR1P18146 543 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 CCL1P22362 96 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 HAAOP46952 286 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 RAB40BQ12829 278 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 MED21Q13503 144 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms