RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 YIF1BQ5BJH7 314 aa13.6□□□□□ -0.23
RAB5C-201ENST00000346213 FAM27D1Q5T7N8 215 aa13.6□□□□□ -0.23
RAB5C-201ENST00000346213 DDI2Q5TDH0 399 aa13.6□□□□□ -0.23
RAB5C-201ENST00000346213 ZNF679Q8IYX0 411 aa13.6□□□□□ -0.23
RAB5C-201ENST00000346213 OR5AS1Q8N127 324 aa13.6□□□□□ -0.23
RAB5C-201ENST00000346213 C1orf159Q96HA4 380 aa13.6□□□□□ -0.23
RAB5C-201ENST00000346213 PDCD1LG2Q9BQ51 273 aa13.6□□□□□ -0.23
RAB5C-201ENST00000346213 WACQ9BTA9 647 aa13.6□□□□□ -0.23
RAB5C-201ENST00000346213 MIXL1Q9H2W2 232 aa13.6□□□□□ -0.23
RAB5C-201ENST00000346213 ABCB9Q9NP78 766 aa13.6□□□□□ -0.23
RAB5C-201ENST00000346213 SMIM30A4D0T7 59 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 H0YL77 283 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 UPK1BO75841 260 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 ZFPL1O95159 310 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 ACHEP22303 614 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 LMO4P61968 165 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 EIF2B1Q14232 305 aaKnown RBP13.59□□□□□ -0.23
RAB5C-201ENST00000346213 ZNF181Q2M3W8 571 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 RGS21Q2M5E4 152 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 CYB5R2Q6BCY4 276 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 MZT2AQ6P582 158 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 Q6ZNX1 250 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 LAX1Q8IWV1 398 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 OR2G2Q8NGZ5 317 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 OR5AK2Q8NH90 309 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 CHPT1Q8WUD6 406 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 ACOT12Q8WYK0 555 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 MDFIQ99750 246 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 ABHD6Q9BV23 337 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 ELOVL3Q9HB03 270 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 NKIRAS2Q9NYR9 191 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 FRRS1LQ9P0K9 344 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 FBXO9Q9UK97 447 aaPredicted RBP13.59□□□□□ -0.23
RAB5C-201ENST00000346213 ADH4P08319 380 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 SELEP16581 610 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 KITLGP21583 273 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 GCH1P30793 250 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 PPP3R1P63098 170 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 SNAI3Q3KNW1 292 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 OR2T2Q6IF00 324 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 NR2C2APQ86WQ0 139 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 GJC3Q8NFK1 279 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 ST7LQ8TDW4 575 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 KCTD12Q96CX2 325 aaKnown RBP13.59□□□□□ -0.23
RAB5C-201ENST00000346213 MROQ9BYG7 248 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 HDHD2Q9H0R4 259 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 ATPIF1Q9UII2 106 aa13.59□□□□□ -0.23
RAB5C-201ENST00000346213 A0A0G2JK05 382 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 IGHV1-69-2A0A0G2JMI3 117 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 IGHV3-64DA0A0J9YX35 117 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 LOC100289279A0A1B0GTE1 492 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 ISPDA4D126 451 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 TMEM212A6NML5 194 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 OR4C45A6NMZ5 311 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 ZNF879B4DU55 563 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 MLNRO43193 412 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 GPR6P46095 362 aaPredicted RBP13.58□□□□□ -0.24
RAB5C-201ENST00000346213 CCR9P51686 369 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 MRPS11P82912 194 aaKnown RBP13.58□□□□□ -0.24
RAB5C-201ENST00000346213 SRSF2Q01130 221 aaKnown RBP13.58□□□□□ -0.24
RAB5C-201ENST00000346213 DEGS2Q6QHC5 323 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 LRRN1Q6UXK5 716 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 KRT77Q7Z794 578 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 RGP1Q92546 391 aaPredicted RBP13.58□□□□□ -0.24
RAB5C-201ENST00000346213 HAVCR1Q96D42 359 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 OR14A2Q96R54 314 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 CCDC32Q9BV29 185 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 C1QTNF5Q9BXJ0 243 aa13.58□□□□□ -0.24
RAB5C-201ENST00000346213 ATRQ13535 2644 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 F5H5K5 113 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 PPIHO43447 177 aaKnown RBP13.57□□□□□ -0.24
RAB5C-201ENST00000346213 TIMM8AO60220 97 aaPredicted RBP13.57□□□□□ -0.24
RAB5C-201ENST00000346213 ZNF254O75437 659 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 ERCC1P07992 297 aaPredicted RBP13.57□□□□□ -0.24
RAB5C-201ENST00000346213 RAB3BP20337 219 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 OTX1P32242 354 aaPredicted RBP13.57□□□□□ -0.24
RAB5C-201ENST00000346213 RIDAP52758 137 aaKnown RBP13.57□□□□□ -0.24
RAB5C-201ENST00000346213 CBX3Q13185 183 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 FBXW12Q6X9E4 464 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 SPATC1Q76KD6 591 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 DCXRQ7Z4W1 244 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 OR10AD1Q8NGE0 317 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 COMMD4Q9H0A8 199 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 ZCCHC4Q9H5U6 513 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 SAP30LQ9HAJ7 183 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 LPAR2Q9HBW0 351 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 DDX28Q9NUL7 540 aaKnown RBP13.57□□□□□ -0.24
RAB5C-201ENST00000346213 COMMD3Q9UBI1 195 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 WIPI2Q9Y4P8 454 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 V9GYH0 126 aa13.57□□□□□ -0.24
RAB5C-201ENST00000346213 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.57□□□□□ -0.244e-7■■■□□ 16.3
RAB5C-201ENST00000346213 TRBV5-5A0A0J9YX44 114 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 LMX1BO60663 402 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 CD55P08174 381 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 SLC2A1P11166 492 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 GZMKP49863 264 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 Q499Y3 187 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 HSD17B12Q53GQ0 312 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 SFXN4Q6P4A7 337 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 DCDC5Q6ZRR9 648 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms