RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 IGLV3-27P01718 113 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 REC114Q7Z4M0 266 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 TGIF2LXQ8IUE1 241 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 FAM219AQ8IW50 185 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 BHLHE23Q8NDY6 225 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 SLC17A4Q9Y2C5 497 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 MYH14Q7Z406 1995 aaKnown RBP10.86□□□□□ -0.67
COL12A1-202ENST00000345356 SERTM2A0A1B0GWG4 89 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 GDF1P27539 372 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 SLC25A1P53007 311 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 ZNF121P58317 390 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-202ENST00000345356 VWA1Q6PCB0 445 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 C19orf35Q6ZS72 473 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 OR5AU1Q8NGC0 362 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 CIB3Q96Q77 187 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-202ENST00000345356 ST3GAL6Q9Y274 331 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 A0A0B4J2E0 115 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 A0A1B0GX12 115 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 M0R135 149 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 PPM1DO15297 605 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 PABPC1L2AQ5JQF8 200 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 S100A7AQ86SG5 101 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 VN1R17PQ8TDU5 208 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 RDH5Q92781 318 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 ZNF799Q96GE5 643 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 SRPK3Q9UPE1 567 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 PRAMEF26H0Y7S4 382 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 F11P03951 625 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 RNF224P0DH78 156 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 LIMK1P53667 647 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 FOXK1P85037 733 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 THEM4Q5T1C6 240 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 NKAIN2Q5VXU1 208 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 MCHR2Q969V1 340 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 NEU3Q9UQ49 428 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 M0R1X1 148 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 TRGC2P03986 189 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 OR5AC1P0C628 307 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 PGA3P0DJD8 388 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 FFAR4Q5NUL3 377 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 SLC39A11Q8N1S5 342 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 OR11G2Q8NGC1 345 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 NAA60Q9H7X0 242 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 ZNF207O43670 478 aaKnown RBP10.85□□□□□ -0.67
COL12A1-202ENST00000345356 RCC1P18754 421 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-202ENST00000345356 MDKP21741 143 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-202ENST00000345356 IFI44Q8TCB0 444 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 LAT2Q9GZY6 243 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 GSX1Q9H4S2 264 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-202ENST00000345356 SSUH2Q9Y2M2 353 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 KIF13AQ9H1H9 1805 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 PRKNO60260 465 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-202ENST00000345356 NRASP01111 189 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 APOBEC1P41238 236 aaKnown RBP10.85□□□□□ -0.67
COL12A1-202ENST00000345356 GZMMP51124 257 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 SURF2Q15527 256 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-202ENST00000345356 MORN4Q8NDC4 146 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 OR4D11Q8NGI4 311 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 KIR3DX1Q9H7L2 352 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 SHROOM3Q8TF72 1996 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 K7EQM0 130 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 SPINT2O43291 252 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 EIF1BO60739 113 aaKnown RBP10.85□□□□□ -0.67
COL12A1-202ENST00000345356 MZT1Q08AG7 82 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 DDA1Q9BW61 102 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 ZNF275Q9NSD4 429 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-202ENST00000345356 FER1L6Q2WGJ9 1857 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 A0A087WUJ7 227 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 LINC01553A4QN01 128 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 URB1O60287 2271 aaKnown RBP10.85□□□□□ -0.67
COL12A1-202ENST00000345356 GYPAP02724 150 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 CYBAP13498 195 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 ICAM2P13598 275 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 MAML2Q8IZL2 1156 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-202ENST00000345356 SLC25A22Q9H936 323 aa10.85□□□□□ -0.67
COL12A1-202ENST00000345356 SERTM1A2A2V5 107 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 TMEM52BQ4KMG9 183 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 ANAPC16Q96DE5 110 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 CHRDL1Q9BU40 450 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 CCL27Q9Y4X3 112 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 LOXHD1Q8IVV2 1947 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 TEX50A0A1B0GTY4 177 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 DBX1A6NMT0 343 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 SPRY1O43609 319 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-202ENST00000345356 FAHP16930 419 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 EN2P19622 333 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-202ENST00000345356 NAAAQ02083 359 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 MPV17LQ2QL34 196 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 PET117Q6UWS5 81 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 OSR2Q8N2R0 312 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 WBP2Q969T9 261 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 SDHCQ99643 169 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-202ENST00000345356 DHCR7Q9UBM7 475 aaKnown RBP10.84□□□□□ -0.67
COL12A1-202ENST00000345356 COL14A1Q05707 1796 aaKnown RBP10.84□□□□□ -0.67
COL12A1-202ENST00000345356 ZNF749O43361 778 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 P2RY1P47900 373 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 CDX1P47902 265 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-202ENST00000345356 AGFG1P52594 562 aaKnown RBP10.84□□□□□ -0.67
COL12A1-202ENST00000345356 LAIR2Q6ISS4 152 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 ETV3LQ6ZN32 361 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms