RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 EMC4Q5J8M3 183 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 NKAIN2Q5VXU1 208 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 RGMBQ6NW40 437 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 FBXO46Q6PJ61 603 aaPredicted RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 ISCA2Q86U28 154 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 ARHGEF39Q8N4T4 335 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 WDFY2Q96P53 400 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 GSTO2Q9H4Y5 243 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 TMEM38AQ9H6F2 299 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 TREX1Q9NSU2 369 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 PRSS50Q9UI38 385 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 BCL9O00512 1426 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 MPC2O95563 127 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 MELTFP08582 738 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 RBM11P57052 281 aaKnown RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 ELAVL1Q15717 326 aaKnown RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 ZNF418Q8TF45 676 aaPredicted RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 CBLN4Q9NTU7 201 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 CDC42EP3Q9UKI2 254 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 POLDIP2Q9Y2S7 368 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 DOK2O60496 412 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 HIST1H1DP16402 221 aaKnown RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 ROM1Q03395 351 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 CYB5R2Q6BCY4 276 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 FBXL22Q6P050 247 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 GLIPR1L1Q6UWM5 242 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 LILRA2Q8N149 483 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 OR5R1Q8NH85 324 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 ISL2Q96A47 359 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 ISOC2Q96AB3 205 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 TMEM70Q9BUB7 260 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 PELI2Q9HAT8 420 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 ZNF732B4DXR9 585 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 GPNMBQ14956 572 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 LTC4SQ16873 150 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 OR10G3Q8NGC4 313 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 OR10G8Q8NGN5 311 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 GPR150Q8NGU9 434 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 OR51H1Q8NH63 302 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 FGFBP2Q9BYJ0 223 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 GPR62Q9BZJ7 368 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 F11P03951 625 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 NID1P14543 1247 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 CSNK1EP49674 416 aaKnown RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 ZNF506Q5JVG8 444 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 TPGS2Q68CL5 300 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 MISPQ8IVT2 679 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 OR5A1Q8NGJ0 315 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 OR5D18Q8NGL1 313 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 DNASE2BQ8WZ79 361 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 DEFB126Q9BYW3 111 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 FBXL12Q9NXK8 326 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 JKAMPQ9P055 326 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 A4GNTQ9UNA3 340 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 SSC5DA1L4H1 1573 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 CCR5P51681 352 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 SNRPNP63162 240 aaKnown RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 RELBQ01201 579 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 CIRBPQ14011 172 aaKnown RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 CPEB2Q7Z5Q1 589 aaKnown RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 SYT9Q86SS6 491 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 TUSC5Q8IXB3 177 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 ARRDC3Q96B67 414 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 GABRG3Q99928 467 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 TRBV9A0A0B4J1U6 114 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 A0A0B4J293 547 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 SMIM28A0A1B0GU29 152 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 GPANK1O95872 356 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 OR8G3PP0DMU2 310 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 FOLR2P14207 255 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 SEC13P55735 322 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 GNB1P62873 340 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 HSD17B8Q92506 261 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 SHDQ96IW2 340 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 SERINC2Q96SA4 455 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 SLIRPQ9GZT3 109 aaKnown RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 FBXO4Q9UKT5 387 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 H3BQ15 152 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 ADAMTS4O75173 837 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 NDUFB6O95139 128 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 HLA-DQA1P01909 254 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 DUSP8Q13202 625 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 RTP2Q5QGT7 225 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 C17orf78Q8N4C9 275 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 OR1P1Q8NH06 330 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 DIO2Q92813 273 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 TAAR6Q96RI8 345 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 DOK1Q99704 481 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 ZCWPW2A0A1B0GU75 182 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 A0A1B0GW15 77 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 ZNF195O14628 629 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 PIAS2O75928 621 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 DAOP14920 347 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 CAMPP49913 170 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 RNF165Q6ZSG1 346 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 PRSS45Q7RTY3 260 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 MEX3DQ86XN8 651 aaKnown RBP5.59□□□□□ -1.51
VCAN-203ENST00000343200 MBOAT4Q96T53 435 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 PRSS16Q9NQE7 514 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 MEIKINA0A087WXM9 373 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms