RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 MND1Q9BWT6 205 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 FN3KRPQ9HA64 309 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 MYOZ1Q9NP98 299 aaPredicted RBP11.13□□□□□ -0.63
TUBD1-202ENST00000340993 HHLA2Q9UM44 414 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 TMEM212A6NML5 194 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 VWC2LB2RUY7 222 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 AKR7A2O43488 359 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 DENRO43583 198 aaKnown RBP11.12□□□□□ -0.63
TUBD1-202ENST00000340993 RHBDL1O75783 438 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 CST4P01036 141 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 RPSAP08865 295 aaKnown RBP11.12□□□□□ -0.63
TUBD1-202ENST00000340993 CCDC159P0C7I6 412 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 OCM2P0CE71 109 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 OCMP0CE72 109 aaPredicted RBP11.12□□□□□ -0.63
TUBD1-202ENST00000340993 SLC25A16P16260 332 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 EGR1P18146 543 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 CELP19835 753 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 CCL1P22362 96 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 UBE2V2Q15819 145 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 FDX2Q6P4F2 183 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 ANGPTL5Q86XS5 388 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 PLPP7Q8NBV4 271 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 OR13C9Q8NGT0 318 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 CLDND2Q8NHS1 167 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 LRRC29Q8WV35 223 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 TIMD4Q96H15 378 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 ZNF488Q96MN9 340 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 TMUB1Q9BVT8 246 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 C14orf119Q9NWQ9 140 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 DHDHQ9UQ10 334 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 MPC1Q9Y5U8 109 aa11.12□□□□□ -0.63
TUBD1-202ENST00000340993 A0A096LNT2 108 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 TMEM178BH3BS89 294 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 CCR9P51686 369 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 INSL4Q14641 139 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 ZMYND11Q15326 602 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 RBM48Q5RL73 367 aaKnown RBP11.11□□□□□ -0.63
TUBD1-202ENST00000340993 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.11□□□□□ -0.632e-6■■■■□ 25.9
TUBD1-202ENST00000340993 RPL22L1Q6P5R6 122 aaKnown RBP11.11□□□□□ -0.63
TUBD1-202ENST00000340993 HAGHLQ6PII5 290 aaPredicted RBP11.11□□□□□ -0.63
TUBD1-202ENST00000340993 RNF144BQ7Z419 303 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 PEG10Q86TG7 708 aaKnown RBP11.11□□□□□ -0.63
TUBD1-202ENST00000340993 SCCPDHQ8NBX0 429 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 ZNF485Q8NCK3 441 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 OR11L1Q8NGX0 322 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 GHSRQ92847 366 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 SMIM19Q96E16 107 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 COX4I2Q96KJ9 171 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 TMED9Q9BVK6 235 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 SNTG1Q9NSN8 517 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 NOP16Q9Y3C1 178 aaKnown RBP11.11□□□□□ -0.63
TUBD1-202ENST00000340993 NPTNQ9Y639 398 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 LRRC30A6NM36 301 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 NDUFS8O00217 210 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 ZNF16P17020 682 aaPredicted RBP11.11□□□□□ -0.63
TUBD1-202ENST00000340993 GIFP27352 417 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 HAAOP46952 286 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 TGM4P49221 684 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 TMEM33P57088 247 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 BTG1P62324 171 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 CEACAM21Q3KPI0 293 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 C11orf53Q8IXP5 236 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 OR5T2Q8NGG2 359 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 OR5D18Q8NGL1 313 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 RAB1CQ92928 201 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 DUSP21Q9H596 190 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 TAS2R4Q9NYW5 299 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 BLOC1S6Q9UL45 172 aa11.11□□□□□ -0.63
TUBD1-202ENST00000340993 A0A1B0GWJ7 208 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 SYNGR1O43759 233 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 CALCBP10092 127 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 ATP6V1B1P15313 513 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 POU3F4P49335 361 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 MRPS11P82912 194 aaKnown RBP11.1□□□□□ -0.63
TUBD1-202ENST00000340993 TMEM249Q2WGJ8 235 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 LIPKQ5VXJ0 399 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 SPERTQ8NA61 448 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 TMEM203Q969S6 136 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 OR14A2Q96R54 314 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 CDCA4Q9BXL8 241 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 WDR13Q9H1Z4 485 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 RNF7Q9UBF6 113 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 PCDHB10Q9UN67 800 aa11.1□□□□□ -0.63
TUBD1-202ENST00000340993 LSM2Q9Y333 95 aaKnown RBP11.1□□□□□ -0.63
TUBD1-202ENST00000340993 IGKV1-27A0A075B6S5 117 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 IGKV1-9A0A0C4DH69 117 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 FAM157AC9JC47 383 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 LY6G6DO95868 133 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 GYPAP02724 150 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 ISG15P05161 165 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 GATA4P43694 442 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 SEC61A1P61619 476 aaKnown RBP11.09□□□□□ -0.63
TUBD1-202ENST00000340993 GNG3P63215 75 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 MZT1Q08AG7 82 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 MRPL28Q13084 256 aaKnown RBP11.09□□□□□ -0.63
TUBD1-202ENST00000340993 IRF3Q14653 427 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 SPHARQ15513 63 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 DMKNQ6E0U4 476 aaPredicted RBP11.09□□□□□ -0.63
TUBD1-202ENST00000340993 WDR82Q6UXN9 313 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 PRSS48Q7RTY5 328 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms