RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 FBXL17Q9UF56 701 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 VSIG4Q9Y279 399 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 TMED5Q9Y3A6 229 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 IGHV4OR15-8A0A075B7B6 117 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 A0A087WW49 117 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 IZUMO1RA6ND01 250 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 IFNA4P05014 189 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 GRK5P34947 590 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 GABRA2P47869 451 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 CD81P60033 236 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 ZNF74Q16587 644 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 OR4F3Q6IEY1 312 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 LCN8Q6JVE9 175 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 ULK3Q6PHR2 472 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 SLC2A7Q6PXP3 512 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 PGAP1Q75T13 922 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 C5orf24Q7Z6I8 188 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 RIMKLAQ8IXN7 391 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 OR1M1Q8NGA1 313 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 ERP44Q9BS26 406 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 TMEM43Q9BTV4 400 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 EVA1AQ9H8M9 152 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 GIMAP2Q9UG22 337 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 ZNF222Q9UK12 451 aa8.29□□□□□ -1.08
ATXN3-201ENST00000340660 IGHV2-26A0A0B4J1V2 119 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 MEX3AA1L020 520 aaKnown RBP8.28□□□□□ -1.08
ATXN3-201ENST00000340660 H0Y980 276 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 CDIPTO14735 213 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 POLR3GO15318 223 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-201ENST00000340660 TPPPO94811 219 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 SEC31AO94979 1220 aaKnown RBP8.28□□□□□ -1.08
ATXN3-201ENST00000340660 CH25HO95992 272 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 HTR1DP28221 377 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 MDH1P40925 334 aaKnown RBP8.28□□□□□ -1.08
ATXN3-201ENST00000340660 NAA10P41227 235 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-201ENST00000340660 MECP2P51608 486 aaKnown RBP8.28□□□□□ -1.08
ATXN3-201ENST00000340660 ACTA2P62736 377 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 ACTG2P63267 376 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 ACTC1P68032 377 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 ACTA1P68133 377 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 RBMS2Q15434 407 aaKnown RBP8.28□□□□□ -1.08
ATXN3-201ENST00000340660 RSPO1Q2MKA7 263 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-201ENST00000340660 FGD3Q5JSP0 725 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 FAM91A1Q658Y4 838 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 SMARCD3Q6STE5 483 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 DPY19L4Q7Z388 723 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 C10orf107Q8IVU9 208 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 TMEM217Q8N7C4 229 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 LRRC8CQ8TDW0 803 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 L3HYPDHQ96EM0 354 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 GON7Q9BXV9 100 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 TUBB1Q9H4B7 451 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 C14orf119Q9NWQ9 140 aa8.28□□□□□ -1.08
ATXN3-201ENST00000340660 IGLV2-18A0A075B6J9 118 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 A0A0B4J2E0 115 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 A0A1B0GX12 115 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 A0A1W2PRG6 482 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 KRTAP23-1A1A580 65 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 GMNCA6NCL1 334 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 OR2AT4A6NND4 320 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 LGALS9O00182 355 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 FGF16O43320 207 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 CAPZA1P52907 286 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 PRKAA2P54646 552 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 XGP55808 180 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 PGS1Q32NB8 556 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 C1orf134Q5TEV5 83 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 SPATA12Q7Z6I5 190 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 ANKRD46Q86W74 232 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 CALHM1Q8IU99 346 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 NEURL2Q9BR09 285 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 ELOVL1Q9BW60 279 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 NLKQ9UBE8 527 aa8.27□□□□□ -1.09
ATXN3-201ENST00000340660 RER1O15258 196 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 CD7P09564 240 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 ASAH2BP0C7U1 165 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 LINC00032P0C843 101 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 PIPP12273 146 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-201ENST00000340660 CTLA4P16410 223 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 ANOS1P23352 680 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 BMI1P35226 326 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 GUCA1AP43080 201 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-201ENST00000340660 DAP3P51398 398 aaKnown RBP8.26□□□□□ -1.09
ATXN3-201ENST00000340660 RPL18Q07020 188 aaKnown RBP8.26□□□□□ -1.09
ATXN3-201ENST00000340660 HDDC2Q7Z4H3 204 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 OR2T27Q8NH04 317 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 SLC35B4Q969S0 331 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 CHCHD6Q9BRQ6 235 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 SLC35A5Q9BS91 424 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 NUF2Q9BZD4 464 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 DPM3Q9P2X0 92 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 ATPIF1Q9UII2 106 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 MAGEL2Q9UJ55 1249 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 ANGPT4Q9Y264 503 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 COMMD3-BMI1R4GMX3 469 aa8.26□□□□□ -1.09
ATXN3-201ENST00000340660 FAM90A18PA6NE21 464 aa8.25□□□□□ -1.09
ATXN3-201ENST00000340660 FAM90A16PA6NEW6 464 aa8.25□□□□□ -1.09
ATXN3-201ENST00000340660 FAM90A20PA6NIJ5 464 aa8.25□□□□□ -1.09
ATXN3-201ENST00000340660 FAM90A9PA6NNJ1 464 aa8.25□□□□□ -1.09
ATXN3-201ENST00000340660 FAM90A12PA8MX19 464 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms