RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 GGTLC2Q14390 218 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 NCMAPQ5T1S8 102 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 C16orf47Q6ZP98 133 aaPredicted RBP13.23□□□□□ -0.29
RRP1B-201ENST00000340648 LANCL3Q6ZV70 420 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 SLC25A26Q70HW3 274 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 ZNF321PQ8N8H1 164 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 MARVELD3Q96A59 401 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 ZNF707Q96C28 371 aaPredicted RBP13.23□□□□□ -0.29
RRP1B-201ENST00000340648 SAT2Q96F10 170 aaPredicted RBP13.23□□□□□ -0.29
RRP1B-201ENST00000340648 SLC35B3Q9H1N7 401 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 SOCS1O15524 211 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 FABP4P15090 132 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 H2BFSP57053 126 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 DEGS2Q6QHC5 323 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 SMIM7Q9BQ49 75 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 NMES1Q9C002 83 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 PPP1R3CQ9UQK1 317 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 VAMP5O95183 116 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 PTGFRP43088 359 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 PIK3IP1Q96FE7 263 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 TMEM68Q96MH6 324 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 RPP25Q9BUL9 199 aaKnown RBP13.23□□□□□ -0.29
RRP1B-201ENST00000340648 AMDHD2Q9Y303 409 aa13.23□□□□□ -0.29
RRP1B-201ENST00000340648 ARGFXA6NJG6 315 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 PIN1P1O15428 100 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 WDR1O75083 606 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 SEMA7AO75326 666 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 NXPH2O95156 264 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 KITLGP21583 273 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 THBS4P35443 961 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 HOXA1P49639 335 aaPredicted RBP13.22□□□□□ -0.29
RRP1B-201ENST00000340648 SHARPINQ9H0F6 387 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 FAM234AQ9H0X4 552 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 ZNF236Q9UL36 1845 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 PIKFYVEQ9Y2I7 2098 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 C4orf47A7E2U8 309 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 LYSMD4Q5XG99 296 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 OSR2Q8N2R0 312 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 RGP1Q92546 391 aaPredicted RBP13.22□□□□□ -0.29
RRP1B-201ENST00000340648 TDRD15B5MCY1 1934 aaKnown RBP13.22□□□□□ -0.29
RRP1B-201ENST00000340648 DHHO43323 396 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 CATSPERDQ86XM0 798 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 FBXL14Q8N1E6 418 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 OR4F5Q8NH21 305 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 OR4F4Q96R69 305 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 FAAP24Q9BTP7 215 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 PBX4Q9BYU1 374 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 KLK13Q9UKR3 277 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 BOKQ9UMX3 212 aaPredicted RBP13.22□□□□□ -0.29
RRP1B-201ENST00000340648 OSGIN2Q9Y236 505 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 OTOL1A6NHN0 477 aaPredicted RBP13.22□□□□□ -0.29
RRP1B-201ENST00000340648 METTL12A8MUP2 240 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 ALG1L2C9J202 215 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 IGKV1D-16P01601 117 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 KIR3DL2P43630 455 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 ZNF345Q14585 488 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 ISXQ2M1V0 245 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 ZNF528Q3MIS6 628 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 PUSL1Q8N0Z8 303 aaKnown RBP13.22□□□□□ -0.29
RRP1B-201ENST00000340648 PP6455Q8WZ26 134 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 WNT2BQ93097 391 aa13.22□□□□□ -0.29
RRP1B-201ENST00000340648 MYF5P13349 255 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 GCH1P30793 250 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 ZP1P60852 638 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 H3F3AP84243 136 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 OR2B11Q5JQS5 317 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 SYT13Q7L8C5 426 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 RPS4Y2Q8TD47 263 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 MS4A3Q96HJ5 214 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 A0A1W2PPC4 97 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 MLF1P58340 268 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 OR2A2Q6IF42 318 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 OR6S1Q8NH40 331 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 NAT6Q93015 286 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 LAMP3Q9UQV4 416 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 WSB1Q9Y6I7 421 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 CCDC187A0A096LP49 1063 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 IGHV5-51A0A0C4DH38 117 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 IGHV3-64DA0A0J9YX35 117 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 A0A1W2PPQ1 181 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 DEGS1O15121 323 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 HLA-DOBP13765 273 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 B4GALT1P15291 398 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 DGAT2L6Q6ZPD8 337 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 LRRC3BQ96PB8 259 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 TIMM10BQ9Y5J6 103 aa13.21□□□□□ -0.29
RRP1B-201ENST00000340648 MOSPD3O75425 235 aa13.21□□□□□ -0.3
RRP1B-201ENST00000340648 PDGFBP01127 241 aaPredicted RBP13.21□□□□□ -0.3
RRP1B-201ENST00000340648 ERGP11308 486 aa13.21□□□□□ -0.3
RRP1B-201ENST00000340648 COL9A1P20849 921 aa13.21□□□□□ -0.3
RRP1B-201ENST00000340648 LIMK1P53667 647 aa13.21□□□□□ -0.3
RRP1B-201ENST00000340648 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.21□□□□□ -0.3
RRP1B-201ENST00000340648 PPP1R35Q8TAP8 253 aa13.21□□□□□ -0.3
RRP1B-201ENST00000340648 POC1BQ8TC44 478 aa13.21□□□□□ -0.3
RRP1B-201ENST00000340648 INTS12Q96CB8 462 aaKnown RBP13.21□□□□□ -0.3
RRP1B-201ENST00000340648 ALX4Q9H161 411 aaPredicted RBP13.21□□□□□ -0.3
RRP1B-201ENST00000340648 LINC01565O15544 149 aa13.2□□□□□ -0.3
RRP1B-201ENST00000340648 CTXN2P0C2S0 81 aa13.2□□□□□ -0.3
RRP1B-201ENST00000340648 OR5AC1P0C628 307 aa13.2□□□□□ -0.3
RRP1B-201ENST00000340648 ACKR3P25106 362 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms