RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 FAM71E2Q8N5Q1 922 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 PTX4Q96A99 478 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 EIF5A2Q9GZV4 153 aaKnown RBP12.68□□□□□ -0.38
CPSF7-201ENST00000340437 NDRG3Q9UGV2 375 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 NXT1Q9UKK6 140 aaKnown RBP12.68□□□□□ -0.38
CPSF7-201ENST00000340437 CELA2AP08217 269 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 SPINK2P20155 84 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 P2RY4P51582 365 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 HFEQ30201 348 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 PRSS54Q6PEW0 395 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 ANKRD37Q7Z713 158 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 SULF2Q8IWU5 870 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 NOXO1Q8NFA2 376 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 PLEK2Q9NYT0 353 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 MTRF1O75570 445 aaKnown RBP12.67□□□□□ -0.38
CPSF7-201ENST00000340437 FCGR2CP31995 323 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 SNRPEP62304 92 aaKnown RBP12.67□□□□□ -0.38
CPSF7-201ENST00000340437 PCK2Q16822 640 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 C2orf50Q96LR7 162 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 FAAP24Q9BTP7 215 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 DEFB126Q9BYW3 111 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 NMES1Q9C002 83 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 ESRP2Q9H6T0 727 aaKnown RBP12.67□□□□□ -0.38
CPSF7-201ENST00000340437 LPAR3Q9UBY5 353 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 EDARQ9UNE0 448 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 FER1L5A0AVI2 2057 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 NUP210LQ5VU65 1888 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 C1QL1O75973 258 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 S100A6P06703 90 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 RPL12P30050 165 aaKnown RBP12.67□□□□□ -0.38
CPSF7-201ENST00000340437 PTGFRP43088 359 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 FHITP49789 147 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 UQCC3Q6UW78 93 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 LYPD6Q86Y78 171 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 SEMA6DQ8NFY4 1073 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 FNDC9Q8TBE3 224 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 MVB12AQ96EY5 273 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 SHISA7A6NL88 538 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 PIAS2O75928 621 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 IGHMP01871 453 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 CSTBP04080 98 aaKnown RBP12.67□□□□□ -0.38
CPSF7-201ENST00000340437 HPNP05981 417 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 CFPP27918 469 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 RAET1LQ5VY80 246 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 HSD17B11Q8NBQ5 300 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 CD300LFQ8TDQ1 290 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 GNRHR2Q96P88 292 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.67□□□□□ -0.38
CPSF7-201ENST00000340437 MMP26Q9NRE1 261 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 AMDHD2Q9Y303 409 aa12.67□□□□□ -0.38
CPSF7-201ENST00000340437 C9JQL5 133 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 NXPH3O95157 252 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 OR8U9P0C7N5 309 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 CPT2P23786 658 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 AVPI1Q5T686 147 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 OGFOD3Q6PK18 319 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 SLC30A7Q8NEW0 376 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 OR8U1Q8NH10 309 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 MRPL24Q96A35 216 aaKnown RBP12.66□□□□□ -0.38
CPSF7-201ENST00000340437 ZNF501Q96CX3 271 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-201ENST00000340437 NRIP2Q9BQI9 281 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 ZFP57Q9NU63 452 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 SRPK3Q9UPE1 567 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 SCRG1O75711 98 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 GSTP1P09211 210 aaKnown RBP12.66□□□□□ -0.38
CPSF7-201ENST00000340437 SLC39A7Q92504 469 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 SLC26A1Q9H2B4 701 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 FBXL17Q9UF56 701 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 ZNF107Q9UII5 783 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-201ENST00000340437 A0A1W2PR77 199 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 DHRS7CA6NNS2 312 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 IFNA21P01568 189 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 FAM157CP0CG43 387 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 PGA4P0DJD7 388 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 PGA3P0DJD8 388 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 NOVA1P51513 510 aaKnown RBP12.66□□□□□ -0.38
CPSF7-201ENST00000340437 MTCP1P56278 107 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 ABCA11PQ4W5N1 156 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 SHEQ5VZ18 495 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 FAHD2BQ6P2I3 314 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-201ENST00000340437 ARRDC1Q8N5I2 433 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 ZNF441Q8N8Z8 693 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 POC1BQ8TC44 478 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 FAHD2AQ96GK7 314 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 SCGB3A2Q96PL1 93 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 UCN2Q96RP3 112 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 RAB18Q9NP72 206 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 BIN3Q9NQY0 253 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 MEMO1Q9Y316 297 aa12.66□□□□□ -0.38
CPSF7-201ENST00000340437 FGF16O43320 207 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 SCGNO76038 276 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 ZNF17P17021 662 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 FPR2P25090 351 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 ADH6P28332 368 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 PTGER4P35408 488 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 F2RL1P55085 397 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 UBE2V2Q15819 145 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 AADACL3Q5VUY0 350 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 MEX3BQ6ZN04 569 aaKnown RBP12.65□□□□□ -0.38
CPSF7-201ENST00000340437 SLC16A13Q7RTY0 426 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms