RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ZNF850A8MQ14 1090 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 TNFRSF13BO14836 293 aaPredicted RBP11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 ADAM20O43506 726 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 VENTXO95231 258 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 ECDO95905 644 aaPredicted RBP11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 IGLV3-1P01715 115 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 ALPLP05186 524 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 OR2T7P0C7T2 308 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 HCCSP53701 268 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 RIPPLY1Q0D2K3 151 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 LSAMPQ13449 338 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 SFRP4Q6FHJ7 346 aaPredicted RBP11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 LYPD2Q6UXB3 125 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 ZNF826PQ6ZT77 177 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 C9orf139Q6ZV77 190 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 THAP5Q7Z6K1 395 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 COMMD2Q86X83 199 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 FAM90A1Q86YD7 464 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 C11orf53Q8IXP5 236 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 PACRGLQ8N7B6 248 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 BOLLQ8N9W6 283 aaKnown RBP11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 OR2T27Q8NH04 317 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 FAM216AQ8WUB2 273 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 SLC6A7Q99884 636 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 NUDT16L1Q9BRJ7 211 aaKnown RBP11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 DNTTIP1Q9H147 329 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 ZMAT3Q9HA38 289 aaKnown RBP11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 USE1Q9NZ43 259 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 PTTG2Q9NZH5 202 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 ENPP5Q9UJA9 477 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 COPS3Q9UNS2 423 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 R4GMQ9 66 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 ARHGAP32A7KAX9 2087 aa11.1□□□□□ -0.63
SIRPB3P-201ENST00000340424 DOCK11Q5JSL3 2073 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 OR5B21A6NL26 309 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 DHRS7CA6NNS2 312 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 SRRM5B3KS81 715 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 LOC110117498-PIK3R3F6TDL0 507 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 M0R129 80 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 PSMD9O00233 223 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 CDIPTO14735 213 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 DHRS3O75911 302 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 KRT8P05787 483 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 GNG3P63215 75 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 CSNK2BP67870 215 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 SRSF2Q01130 221 aaKnown RBP11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 CEACAM21Q3KPI0 293 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 BCL2L15Q5TBC7 163 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 DOK3Q7L591 496 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 SLC36A1Q7Z2H8 476 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 BCDIN3DQ7Z5W3 292 aaKnown RBP11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 PNLDC1Q8NA58 520 aaKnown RBP11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 C19orf18Q8NEA5 215 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 OR51G2Q8NGK0 314 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 PIGCQ92535 297 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 RNF170Q96K19 258 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 DMRTB1Q96MA1 342 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 RBM38Q9H0Z9 239 aaKnown RBP11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 GPR84Q9NQS5 396 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 IMPAD1Q9NX62 359 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 CTSZQ9UBR2 303 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 SNX5Q9Y5X3 404 aa11.09□□□□□ -0.63
SIRPB3P-201ENST00000340424 SNTNA6NMZ2 147 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 PRR32B1ATL7 298 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 TMPRSS2O15393 492 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 SRSF10O75494 262 aaKnown RBP11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 SULT1C4O75897 302 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 GYPAP02724 150 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 TFAP2AP05549 437 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 ATP6V1E1P36543 226 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 MTNR1AP48039 350 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 ALDH3A2P51648 485 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 RELBQ01201 579 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 KLF17Q5JT82 389 aaPredicted RBP11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 SLC25A30Q5SVS4 291 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 MEDAGQ5VYS4 303 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 KCTD8Q6ZWB6 473 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 ELMOD2Q8IZ81 293 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 LINC00528Q8N1L1 170 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 CCDC54Q8NEL0 328 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 OR5A2Q8NGI9 324 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 OR51E1Q8TCB6 317 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 HPSE2Q8WWQ2 592 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 DGCR14Q96DF8 476 aaKnown RBP11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 HRASLS5Q96KN8 279 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 MS4A7Q9GZW8 240 aaPredicted RBP11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 OR52A1Q9UKL2 312 aa11.08□□□□□ -0.64
SIRPB3P-201ENST00000340424 NKX6-3A6NJ46 265 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 TRIM64CA6NLI5 447 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 ZNF879B4DU55 563 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 C22orf46C9J442 243 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 DVL1O14640 695 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 EI24O14681 340 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 PLATP00750 562 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 TTRP02766 147 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 EGR1P18146 543 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 POLR2IP36954 125 aaKnown RBP11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 ACTC1P68032 377 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms