RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 DEPPQ9NTK1 212 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 MYEF2Q9P2K5 600 aaKnown RBP9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NUP50Q9UKX7 468 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PIGLQ9Y2B2 252 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NOP16Q9Y3C1 178 aaKnown RBP9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CCDC187A0A096LP49 1063 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NMBP08949 121 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 MMP7P09237 267 aaPredicted RBP9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 DTYMKP23919 212 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NTF4P34130 210 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SORDQ00796 357 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 AANATQ16613 207 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ZNF660Q6AZW8 331 aaPredicted RBP9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OVCH2Q7RTZ1 564 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 REG4Q9BYZ8 158 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ARL6Q9H0F7 186 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ZNF703Q9H7S9 590 aaPredicted RBP9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CRLF2Q9HC73 371 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 C5orf63A6NC05 138 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RNF222A6NCQ9 220 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FIGNL2A6NMB9 653 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PRSS44E7EML9 344 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 STMND1H3BQB6 276 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 XRCC2O43543 280 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NEURL1O76050 574 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SFT2D2O95562 160 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RFPL3SP0C7P2 107 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 POU3F2P20265 443 aaPredicted RBP9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SLC6A9P48067 706 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SNAI3Q3KNW1 292 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PLXDC2Q6UX71 529 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ACOT7LQ6ZUV0 252 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 YRDCQ86U90 279 aaKnown RBP9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR5AP2Q8NGF4 316 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR51T1Q8NGJ9 327 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR5H2Q8NGV7 314 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 C1QTNF5Q9BXJ0 243 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR2H1Q9GZK4 316 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 GPR35Q9HC97 309 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 COMMD9Q9P000 198 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FXYD6-FXYD2A0A087WZ82 144 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 hCG_38984A0A1B0GV85 526 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 hCG_1807616A0A1W2PRN6 198 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 MFSD2BA6NFX1 497 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ZNF724A8MTY0 619 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CXCL13O43927 109 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CD59P13987 128 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAHP16930 419 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NUBP1P53384 320 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NKPD1Q17RQ9 610 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SLC22A6Q4U2R8 563 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 AADACL3Q5VUY0 350 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 HSD17B13Q7Z5P4 300 aaPredicted RBP9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ZNF546Q86UE3 836 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 DTX1Q86Y01 620 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 LRRC18Q8N456 261 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ZNF837Q96EG3 531 aaPredicted RBP9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FXYD6Q9H0Q3 95 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 C5orf66Q9H5L9 145 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PCDHB16Q9NRJ7 776 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ABI3Q9P2A4 366 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 B4GALT7Q9UBV7 327 aa9.35□□□□□ -0.91
TRAF3IP2-201ENST00000340026 BCL2L11O43521 198 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RPS18P62269 152 aaKnown RBP9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PLEKHN1Q494U1 663 aaPredicted RBP9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 GALNTL5Q7Z4T8 443 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 C1QL2Q7Z5L3 287 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ZSCAN4Q8NAM6 433 aaPredicted RBP9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR2M7Q8NG81 312 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 EMG1Q92979 244 aaKnown RBP9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TMEM230Q96A57 120 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 REEP6Q96HR9 211 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SPACA5Q96QH8 159 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 S100A13Q99584 98 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 METTL9Q9H1A3 318 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 WNT5BQ9H1J7 359 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 BANF2Q9H503 90 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PARPBPQ9NWS1 579 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SDK2Q58EX2 2172 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 A0A1B0GW55 424 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 LNP1A1A4G5 178 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A10PA6NDY2 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A18PA6NE21 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A16PA6NEW6 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A20PA6NIJ5 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A8PA6NJQ4 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A7PA6NKC0 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A22PA8MWA6 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A12PA8MX19 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A5PA8MXJ8 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A23PA8MXZ1 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 G3V3Y1 287 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CRHP06850 196 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A15PP0C7V4 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A13PP0C7W8 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A14PP0C7W9 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM90A24PP0C7X0 464 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 JMJD7P0C870 316 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 DUX4L2P0CJ85 424 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 DUX4L3P0CJ86 424 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms