RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 LASP1Q14847 261 aaKnown RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 PHF19Q5T6S3 580 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 GVQW1Q8N7I0 195 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 OR7G2Q8NG99 324 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 OR9K2Q8NGE7 335 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 ZCCHC10Q8TBK6 192 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 ERGIC1Q969X5 290 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 BPIFA2Q96DR5 249 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 SLC35A4Q96G79 324 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 SNX22Q96L94 193 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 GINS3Q9BRX5 216 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 PARD6GQ9BYG4 376 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 GSX1Q9H4S2 264 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 RAB18Q9NP72 206 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 ANAPC10Q9UM13 185 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 MRPS18BQ9Y676 258 aaKnown RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 CHD3Q12873 2000 aaKnown RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 RIF1Q5UIP0 2472 aaKnown RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 TLCD2A6NGC4 264 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 H0YL77 283 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 ZNF432O94892 652 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 TXNDC12O95881 172 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 GSTP1P09211 210 aaKnown RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 OR13C7P0DN81 318 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 IGFBP3P17936 291 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 KLK2P20151 261 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 PPP2R1BP30154 601 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 AKT2P31751 481 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 NKX6-1P78426 367 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 EIF2B1Q14232 305 aaKnown RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 ZNF260Q3ZCT1 412 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 ZNF776Q68DI1 518 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 LINC00114Q6XXX2 140 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 KCTD9Q7L273 389 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 ZNF550Q7Z398 422 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 OR4X1Q8NH49 305 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 TSACCQ96A04 125 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 TNFRSF13CQ96RJ3 184 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 RTBDNQ9BSG5 229 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 SLCO5A1Q9H2Y9 848 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 C6orf106Q9H6K1 298 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 FBXL17Q9UF56 701 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 SLC17A4Q9Y2C5 497 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 LOC105371242A0A075B767 164 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 CCL25O15444 150 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 SRP19P09132 144 aaKnown RBP4.93□□□□□ -1.62
CSDE1-202ENST00000339438 OR5AC1P0C628 307 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 TMEM11P17152 192 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 FUT3P21217 361 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 MC3RP41968 323 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 DLK1P80370 383 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 PAX5Q02548 391 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 C1orf61Q13536 156 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 OR52L1Q8NGH7 329 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 OR52N4Q8NGI2 321 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 C22orf15Q8WYQ4 148 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 GAL3ST4Q96RP7 486 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 GPR87Q9BY21 358 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 GLRX2Q9NS18 164 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 OSGIN2Q9Y236 505 aa4.93□□□□□ -1.62
CSDE1-202ENST00000339438 PIEZO1Q92508 2521 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 C13orf42A0A1B0GVH6 325 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 DHRS7CA6NNS2 312 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 K7N7A8 449 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 EIF1AYO14602 144 aaKnown RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 GEMIN2O14893 280 aaKnown RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 RRP8O43159 456 aaKnown RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 STK17BO94768 372 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 RCBTB2O95199 551 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 SEC11BP0C7V7 166 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 AK4P27144 223 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 EIF1AXP47813 144 aaKnown RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 PMPCAQ10713 525 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 FZD2Q14332 565 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 DEGS2Q6QHC5 323 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 SLC25A26Q70HW3 274 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 ZNF761Q86XN6 746 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 OR2L8Q8NGY9 312 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 TMEM106AQ96A25 262 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 LINC00615Q96LM1 132 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 SH3BGRL3Q9H299 93 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 SMDT1Q9H4I9 107 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 ZMAT3Q9HA38 289 aaKnown RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 TMEM242Q9NWH2 141 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 MYOTQ9UBF9 498 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 OR52A1Q9UKL2 312 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 GPR132Q9UNW8 380 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 OTOGQ6ZRI0 2925 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 CACNA1HO95180 2353 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 TRBV24-1A0A075B6N3 115 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 A0A087WZY1 265 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 A0A1W2PPC4 97 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 RIIAD1A6NNX1 92 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 CRTAPO75718 401 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 TSPAN15O95858 294 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 FGF5P12034 268 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 SOX2P48431 317 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 CCR4P51679 360 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 TMEM33P57088 247 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms