RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ARFRP1Q13795 201 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 C1orf100Q5SVJ3 147 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 SPATA46Q5T0L3 261 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 C10orf128Q5T292 105 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 DOK3Q7L591 496 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 TCTE3Q8IZS6 198 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 KCNE4Q8WWG9 221 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 PIGCQ92535 297 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 PNPLA2Q96AD5 504 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 LPAR5Q9H1C0 372 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 ABI3Q9P2A4 366 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 KCNAB3O43448 404 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 NDUFB6O95139 128 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 C1QBP02746 253 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF250P15622 560 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 DNASE1P24855 282 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF81P51508 661 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF92Q03936 586 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 AIMP2Q13155 320 aaKnown RBP10.97□□□□□ -0.65
LIMK1-201ENST00000336180 HIKESHIQ53FT3 197 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 STX12Q86Y82 276 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 OR1F12Q8NHA8 337 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 TMEM59Q9BXS4 323 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF552Q9H707 407 aaPredicted RBP10.97□□□□□ -0.65
LIMK1-201ENST00000336180 IFT46Q9NQC8 304 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 ICE1Q9Y2F5 2266 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 METTL21EPA6NDL7 271 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 C21orf140B9A014 251 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 TEX46H3BTG2 121 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 CDC14BO60729 498 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 LPLP06858 475 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 MTCP1P56278 107 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 TMEM50BP56557 158 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 LSM6P62312 80 aaKnown RBP10.97□□□□□ -0.65
LIMK1-201ENST00000336180 DEFB109BQ30KR1 87 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 OR8H1Q8NGG4 311 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 GON7Q9BXV9 100 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 DLL4Q9NR61 685 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 ADGRG4Q8IZF6 3080 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 LOC102725191A0A1B0GVB3 256 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 F8W036 122 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 PDGFAP04085 211 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 TRAPPC2P0DI81 140 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 TRAPPC2BP0DI82 140 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF35P13682 527 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 GABRA1P14867 456 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 MRPS34P82930 218 aaKnown RBP10.96□□□□□ -0.65
LIMK1-201ENST00000336180 TAF9Q16594 264 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF260Q3ZCT1 412 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 FAM27BQ5VT28 67 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 RHOUQ7L0Q8 258 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 C6orf201Q7Z4U5 140 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 SPTSSAQ969W0 71 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 SEC22AQ96IW7 307 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 DPCDQ9BVM2 203 aaPredicted RBP10.96□□□□□ -0.65
LIMK1-201ENST00000336180 B4GALT7Q9UBV7 327 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 RAB22AQ9UL26 194 aa10.96□□□□□ -0.65
LIMK1-201ENST00000336180 C5orf49A4QMS7 147 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 SYNGR3O43761 229 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 NGFP01138 241 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 CSF1P09603 554 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 AKR1C4P17516 323 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 SOX8P57073 446 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 QRFPP83859 136 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 ATXN7L3Q14CW9 347 aaPredicted RBP10.96□□□□□ -0.66
LIMK1-201ENST00000336180 CRIP3Q6Q6R5 217 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 ARMC10Q8N2F6 343 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 NKAIN3Q8N8D7 197 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 NTNG2Q96CW9 530 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 C1orf147Q96MC9 270 aaPredicted RBP10.96□□□□□ -0.66
LIMK1-201ENST00000336180 RANBP3Q9H6Z4 567 aaPredicted RBP10.96□□□□□ -0.66
LIMK1-201ENST00000336180 SPRR3Q9UBC9 169 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 UPB1Q9UBR1 384 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 IGKV1-27A0A075B6S5 117 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 TRBV23-1A0A0A0MS06 115 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 LEUTXA8MZ59 168 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 HSPB6O14558 160 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 SYNGR4O95473 234 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 BLVRBP30043 206 aaPredicted RBP10.96□□□□□ -0.66
LIMK1-201ENST00000336180 TSPAN5P62079 268 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 KCNMB1Q16558 191 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 ZNF766Q5HY98 468 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 ABLIM2Q6H8Q1 611 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 GLDNQ6ZMI3 551 aaPredicted RBP10.96□□□□□ -0.66
LIMK1-201ENST00000336180 MCEMP1Q8IX19 187 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 C9orf62Q8N4C0 152 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 FTMTQ8N4E7 242 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 OR10R2Q8NGX6 335 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 CPNE4Q96A23 557 aaPredicted RBP10.96□□□□□ -0.66
LIMK1-201ENST00000336180 RAB3CQ96E17 227 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 MRI1Q9BV20 369 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 ZNF436Q9C0F3 470 aaPredicted RBP10.96□□□□□ -0.66
LIMK1-201ENST00000336180 OR2H1Q9GZK4 316 aa10.96□□□□□ -0.66
LIMK1-201ENST00000336180 ZNF701Q9NV72 531 aaPredicted RBP10.96□□□□□ -0.66
LIMK1-201ENST00000336180 CREBL2O60519 120 aaPredicted RBP10.95□□□□□ -0.66
LIMK1-201ENST00000336180 DHRS3O75911 302 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 SULT1A3P0DMM9 295 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 SULT1A4P0DMN0 295 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 TMEM11P17152 192 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 VAMP1P23763 118 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms