RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ACKR1Q16570 336 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 TMEM217Q8N7C4 229 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 SLC30A7Q8NEW0 376 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 HAS2Q92819 552 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 TTTY12Q9BZ98 90 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 FN3KRPQ9HA64 309 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 PCDH15Q96QU1 1955 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 C7orf66A4D0T2 115 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 RFPL4AA6NLU0 287 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 RFPL4AL1F8VTS6 287 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 H7C1Q1 480 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 SHOXO15266 292 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 TPPPO94811 219 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 GLSO94925 669 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-201ENST00000334136 ATP1B3P54709 279 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 Q6ZRG5 221 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 TMPRSS11FQ6ZWK6 438 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 TSEN54Q7Z6J9 526 aaKnown RBP10.47□□□□□ -0.73
HDAC6-201ENST00000334136 SIGLEC11Q96RL6 698 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 C1orf198Q9H425 327 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 IFT22Q9H7X7 185 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 RAB22AQ9UL26 194 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 ACACBO00763 2458 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 DBHP09172 617 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 FAM87AP0C7U9 286 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 SNRPEP62304 92 aaKnown RBP10.47□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF85Q03923 595 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 DHRS2Q13268 280 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 PHLDA2Q53GA4 152 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 TMEM251Q8N6I4 163 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF709Q8N972 641 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 FRZBQ92765 325 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 BORCS8Q96FH0 119 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 ABHD17AQ96GS6 310 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 MED29Q9NX70 200 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 MTFP1Q9UDX5 166 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 GPR160Q9UJ42 338 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 A0A0U1RQK1 487 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 C10orf142B7Z368 130 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 GALP22466 123 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF74Q16587 644 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 EIF2S3LQ2VIR3 472 aaKnown RBP10.47□□□□□ -0.73
HDAC6-201ENST00000334136 HIST2H3PS2Q5TEC6 136 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF626Q68DY1 528 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 C11orf87Q6NUJ2 197 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 BVESQ8NE79 360 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 OR10D3Q8NH80 312 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 KCNG3Q8TAE7 436 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 TAAR8Q969N4 342 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 GPR137Q96N19 417 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 C12orf10Q9HB07 376 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 CDH20Q9HBT6 801 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 ASCL3Q9NQ33 180 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 TSTD3H0UI37 97 aa10.46□□□□□ -0.73
HDAC6-201ENST00000334136 NXPH3O95157 252 aa10.46□□□□□ -0.73
HDAC6-201ENST00000334136 SRSF6Q13247 344 aaKnown RBP10.46□□□□□ -0.73
HDAC6-201ENST00000334136 ARL6IP1Q15041 203 aa10.46□□□□□ -0.73
HDAC6-201ENST00000334136 DMKNQ6E0U4 476 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF813Q6ZN06 617 aa10.46□□□□□ -0.73
HDAC6-201ENST00000334136 SSX9Q7RTT3 188 aa10.46□□□□□ -0.73
HDAC6-201ENST00000334136 SLC16A14Q7RTX9 510 aa10.46□□□□□ -0.73
HDAC6-201ENST00000334136 OR56B1Q8NGI3 324 aa10.46□□□□□ -0.73
HDAC6-201ENST00000334136 CMBLQ96DG6 245 aa10.46□□□□□ -0.73
HDAC6-201ENST00000334136 CMSS1Q9BQ75 279 aaKnown RBP10.46□□□□□ -0.73
HDAC6-201ENST00000334136 NDRG3Q9UGV2 375 aa10.46□□□□□ -0.73
HDAC6-201ENST00000334136 OPN4Q9UHM6 478 aa10.46□□□□□ -0.73
HDAC6-201ENST00000334136 C5orf42Q9H799 3197 aa10.46□□□□□ -0.73
HDAC6-201ENST00000334136 DIDO1Q9BTC0 2240 aaKnown RBP10.46□□□□□ -0.74
HDAC6-201ENST00000334136 BCL2L11O43521 198 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 ACTL6AO96019 429 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 IGHA1P01876 353 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 RAB5CP51148 216 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 LRRC18Q8N456 261 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 ARIH2OSQ8N7S6 290 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 INTS12Q96CB8 462 aaKnown RBP10.46□□□□□ -0.74
HDAC6-201ENST00000334136 RRNAD1Q96FB5 475 aaKnown RBP10.46□□□□□ -0.74
HDAC6-201ENST00000334136 SHISA3A0PJX4 238 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 OR7C1O76099 320 aaPredicted RBP10.46□□□□□ -0.74
HDAC6-201ENST00000334136 TMIGD3P0DMS9 266 aaPredicted RBP10.46□□□□□ -0.74
HDAC6-201ENST00000334136 SLC16A13Q7RTY0 426 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 FAM219AQ8IW50 185 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 BATF2Q8N1L9 274 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 LILRB2Q8N423 598 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 PIGTQ969N2 578 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 ADAT1Q9BUB4 502 aaKnown RBP10.46□□□□□ -0.74
HDAC6-201ENST00000334136 JAM3Q9BX67 310 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 C1orf123Q9NWV4 160 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 GFOD1Q9NXC2 390 aa10.46□□□□□ -0.74
HDAC6-201ENST00000334136 IGF2RP11717 2491 aa10.45□□□□□ -0.74
HDAC6-201ENST00000334136 NQO2P16083 231 aa10.45□□□□□ -0.74
HDAC6-201ENST00000334136 IGSF11Q5DX21 431 aa10.45□□□□□ -0.74
HDAC6-201ENST00000334136 OR2A2Q6IF42 318 aa10.45□□□□□ -0.74
HDAC6-201ENST00000334136 AKR1E2Q96JD6 320 aa10.45□□□□□ -0.74
HDAC6-201ENST00000334136 SSX3Q99909 188 aa10.45□□□□□ -0.74
HDAC6-201ENST00000334136 ICAM5Q9UMF0 924 aa10.45□□□□□ -0.74
HDAC6-201ENST00000334136 CDRT15L2A8MXV6 281 aa10.45□□□□□ -0.74
HDAC6-201ENST00000334136 FTCDNL1E5RQL4 147 aa10.45□□□□□ -0.74
HDAC6-201ENST00000334136 ACAA2P42765 397 aaKnown RBP10.45□□□□□ -0.74
HDAC6-201ENST00000334136 ZNF468Q5VIY5 522 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-201ENST00000334136 C1QL3Q5VWW1 255 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms