RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 DOK3Q7L591 496 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 OR10G3Q8NGC4 313 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 OR10C1Q96KK4 312 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 RAB18Q9NP72 206 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 C1orf123Q9NWV4 160 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 LPAR3Q9UBY5 353 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 SPEGQ15772 3267 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 ACACAQ13085 2346 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 FAM221AA4D161 298 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 C1orf196B1AJZ1 125 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 RNASEK-C17orf49H0YIS7 233 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 H0YIZ8 118 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 SSX5O60225 188 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 IL2RAP01589 272 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 SFTA3P0C7M3 94 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 CPT2P23786 658 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 EPHA8P29322 1005 aaPredicted RBP9.29□□□□□ -0.92
COL3A1-202ENST00000317840 FCGR2CP31995 323 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 MTCP1P56278 107 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 FOXK1P85037 733 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 RSU1Q15404 277 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 TAF9Q16594 264 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 PLAC9Q5JTB6 97 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 DRAM2Q6UX65 266 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 AKR1E2Q96JD6 320 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 AKIRIN1Q9H9L7 192 aaPredicted RBP9.29□□□□□ -0.92
COL3A1-202ENST00000317840 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.29□□□□□ -0.92
COL3A1-202ENST00000317840 DENND4AQ7Z401 1863 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 PTPRSQ13332 1948 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 FTCDNL1E5RQL4 147 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 SLC33A1O00400 549 aaPredicted RBP9.29□□□□□ -0.92
COL3A1-202ENST00000317840 NME2P1O60361 137 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 ZFAND5O76080 213 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 DIRAS3O95661 229 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 IFNA2P01563 188 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 CRYBA1P05813 215 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 SPP1P10451 314 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 FPR2P25090 351 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 CBX5P45973 191 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 GABRA4P48169 554 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 ANKRD55Q3KP44 614 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 C6orf201Q7Z4U5 140 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 HSD17B11Q8NBQ5 300 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 GPR132Q9UNW8 380 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 PIGLQ9Y2B2 252 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 THADAQ6YHU6 1953 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 MED19A0JLT2 244 aaPredicted RBP9.28□□□□□ -0.92
COL3A1-202ENST00000317840 ANGPTL7O43827 346 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 CER1O95813 267 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 ID4P47928 161 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 PHLDA2Q53GA4 152 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 BATF2Q8N1L9 274 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 NOXO1Q8NFA2 376 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 FAM117AQ9C073 453 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 BARX1Q9HBU1 254 aaPredicted RBP9.28□□□□□ -0.92
COL3A1-202ENST00000317840 DKKL1Q9UK85 242 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 IGHV3-15A0A0B4J1V0 119 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 TO15178 435 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 XRCC2O43543 280 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 MUC1P15941 1255 aaPredicted RBP9.28□□□□□ -0.92
COL3A1-202ENST00000317840 RPS18P62269 152 aaKnown RBP9.28□□□□□ -0.92
COL3A1-202ENST00000317840 RSPO4Q2I0M5 234 aaPredicted RBP9.28□□□□□ -0.92
COL3A1-202ENST00000317840 OGFOD3Q6PK18 319 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 MEX3BQ6ZN04 569 aaKnown RBP9.28□□□□□ -0.92
COL3A1-202ENST00000317840 C1orf210Q8IVY1 113 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 EMG1Q92979 244 aaKnown RBP9.28□□□□□ -0.92
COL3A1-202ENST00000317840 RNF126Q9BV68 326 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 MOB1AQ9H8S9 216 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 LHFPL6Q9Y693 200 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 PCDH15Q96QU1 1955 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 NSG1A0A0A6YYJ2 146 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 BORCS7-ASMTA0A0B4J1R7 106 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 WIPF3A6NGB9 483 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 TMEM14DPA8MWL7 114 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 PTGFRP43088 359 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 STARD6P59095 220 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 SLC22A8Q8TCC7 542 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 NEK7Q8TDX7 302 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 ZNF285Q96NJ3 590 aa9.28□□□□□ -0.92
COL3A1-202ENST00000317840 NXT1Q9UKK6 140 aaKnown RBP9.28□□□□□ -0.92
COL3A1-202ENST00000317840 LOC390937A0A1W2PQ73 354 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 TP53I11O14683 189 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 TIAF1O95411 115 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 RFC3P40938 356 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 SPIN3Q5JUX0 258 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 SLC30A7Q8NEW0 376 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 SEMA6DQ8NFY4 1073 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 CYYR1Q96J86 154 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 ZNF700Q9H0M5 742 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 GPR173Q9NS66 373 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 CCDC163A0A0D9SF12 145 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 RAD51DO75771 328 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 LCATP04180 440 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 TMEM50BP56557 158 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 OR2A2Q6IF42 318 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 BRICD5Q6PL45 260 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 IL34Q6ZMJ4 242 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 C20orf196Q8IYI0 205 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 OR13G1Q8NGZ3 307 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 MRGPRX4Q96LA9 322 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms