RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ZNF283Q8N7M2 679 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 OR2M7Q8NG81 312 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 OR52N4Q8NGI2 321 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 OR10R2Q8NGX6 335 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 AKR7LQ8NHP1 331 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 MAFIPQ8WZ33 124 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 SEH1LQ96EE3 360 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 C12orf57Q99622 126 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 ZPBPQ9BS86 351 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 PBOV1Q9GZY1 135 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 ESRP2Q9H6T0 727 aaKnown RBP6.68□□□□□ -1.34
TRIM55-202ENST00000315962 PLEK2Q9NYT0 353 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 NCKAP5O14513 1909 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 NCOA6Q14686 2063 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-202ENST00000315962 MED19A0JLT2 244 aaPredicted RBP6.67□□□□□ -1.34
TRIM55-202ENST00000315962 RNF222A6NCQ9 220 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 RFPL4AA6NLU0 287 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 RFPL4AL1F8VTS6 287 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 ETV2O00321 342 aaPredicted RBP6.67□□□□□ -1.34
TRIM55-202ENST00000315962 PGAM2P15259 253 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 CNR1P21554 472 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 ADH6P28332 368 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 NPBWR1P48145 328 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 PPIAP62937 165 aaKnown RBP6.67□□□□□ -1.34
TRIM55-202ENST00000315962 CXADRP78310 365 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 ARG2P78540 354 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 RNFT1Q5M7Z0 435 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 SHEQ5VZ18 495 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 ZNF600Q6ZNG1 722 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 OR13C8Q8NGS7 320 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 OR6X1Q8NH79 312 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 FGFBP3Q8TAT2 258 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 SLC25A43Q8WUT9 341 aaPredicted RBP6.67□□□□□ -1.34
TRIM55-202ENST00000315962 RNF133Q8WVZ7 376 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 ASB17Q8WXJ9 295 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 TMPRSS13Q9BYE2 586 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 TTTY12Q9BZ98 90 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 OR51B6Q9H340 312 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 BARX1Q9HBU1 254 aaPredicted RBP6.67□□□□□ -1.34
TRIM55-202ENST00000315962 TREM1Q9NP99 234 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 LIPGQ9Y5X9 500 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 R4GMQ9 66 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 NCOR2Q9Y618 2525 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 TRBV5-5A0A0J9YX44 114 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 A0A1W2PNV4 684 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 A0A1W2PP11 408 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 HMSDA8MTL9 139 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 F8W036 122 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 CYB5AP00167 134 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 HAAOP46952 286 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 BLOC1S1P78537 153 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 SLC9A3R2Q15599 337 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 TUSC5Q8IXB3 177 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 OR4D6Q8NGJ1 314 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 OR6K3Q8NGY3 331 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 GPR87Q9BY21 358 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 TLNRD1Q9H1K6 362 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 C12orf49Q9H741 205 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 GPR84Q9NQS5 396 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 FAM206AQ9NX38 181 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 RASL12Q9NYN1 266 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 COMMD9Q9P000 198 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 EMC3Q9P0I2 261 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 HHLA2Q9UM44 414 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 EXPH5Q8NEV8 1989 aa6.67□□□□□ -1.34
TRIM55-202ENST00000315962 A0A1B0GV50 99 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 WIPF3A6NGB9 483 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 ZNF98A6NK75 572 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 ZNF736B4DX44 427 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-202ENST00000315962 ADAP1O75689 374 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 PMP2P02689 132 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 CD2P06729 351 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 RD3LP0DJH9 198 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 HOXB1P14653 301 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-202ENST00000315962 GNB3P16520 340 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 CX3CR1P49238 355 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 NOVA1P51513 510 aaKnown RBP6.66□□□□□ -1.34
TRIM55-202ENST00000315962 CSNK2A1P68400 391 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-202ENST00000315962 SNTB1Q13884 538 aaKnown RBP6.66□□□□□ -1.34
TRIM55-202ENST00000315962 IGSF11Q5DX21 431 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 CLEC9AQ6UXN8 241 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 ARMC10Q8N2F6 343 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 TMEM251Q8N6I4 163 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 PRSS33Q8NF86 280 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 FDCSPQ8NFU4 85 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 OR8B12Q8NGG6 310 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 ADAMTS17Q8TE56 1095 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 HRH4Q9H3N8 390 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 CKLFQ9UBR5 152 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 A0A1W2PR80 420 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 MSGN1A6NI15 193 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 H7C2Y5 167 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 SULT1B1O43704 296 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 TLX3O43711 291 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-202ENST00000315962 PMS2P2O95744 297 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 RPA2P15927 270 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 PVALBP20472 110 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-202ENST00000315962 CSRP1P21291 193 aaKnown RBP6.66□□□□□ -1.34
TRIM55-202ENST00000315962 MAPK3P27361 379 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-202ENST00000315962 SRD5A2P31213 254 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms