RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 LHBP01229 141 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 MAP2K3P46734 347 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 CEBPDP49716 269 aaPredicted RBP10.05□□□□□ -0.8
SCFD1-201ENST00000311943 ZNF404Q494X3 552 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 PLCXD3Q63HM9 321 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 ZDHHC23Q8IYP9 409 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 RGP1Q92546 391 aaPredicted RBP10.05□□□□□ -0.8
SCFD1-201ENST00000311943 TMEM186Q96B77 213 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 RDH12Q96NR8 316 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 SPACA5Q96QH8 159 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 FN3KRPQ9HA64 309 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 RNF7Q9UBF6 113 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 PCDHB10Q9UN67 800 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 IGKV1-9A0A0C4DH69 117 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 OR4C45A6NMZ5 311 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 B4DSR2 109 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 H0YHG0 523 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 SYT7O43581 403 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 ZFPL1O95159 310 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 RIPPLY1Q0D2K3 151 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 TMED1Q13445 227 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 TTC23Q5W5X9 447 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 ASPHD2Q6ICH7 369 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 HAGHLQ6PII5 290 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-201ENST00000311943 ZNF841Q6ZN19 808 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 AHSA2Q719I0 299 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 PEG10Q86TG7 708 aaKnown RBP10.04□□□□□ -0.8
SCFD1-201ENST00000311943 KLBQ86Z14 1044 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 CSNK2A3Q8NEV1 391 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 Q8TCH9 128 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 GATAD2BQ8WXI9 593 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 FGGYQ96C11 551 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 CCL13Q99616 98 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 TMPRSS13Q9BYE2 586 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 OR51I2Q9H344 312 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 OPA3Q9H6K4 179 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 MRPS18AQ9NVS2 196 aaKnown RBP10.04□□□□□ -0.8
SCFD1-201ENST00000311943 KCNS2Q9ULS6 477 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 RPL36Q9Y3U8 105 aaKnown RBP10.04□□□□□ -0.8
SCFD1-201ENST00000311943 IGHV3OR16-10A0A075B7F0 116 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 FAM230AA0A1W2PPH8 454 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 MEX3AA1L020 520 aaKnown RBP10.04□□□□□ -0.8
SCFD1-201ENST00000311943 TNFRSF13BO14836 293 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-201ENST00000311943 MPZL2O60487 215 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 NRASP01111 189 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 RPS2P15880 293 aaKnown RBP10.04□□□□□ -0.8
SCFD1-201ENST00000311943 CCL1P22362 96 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 MDH2P40926 338 aaKnown RBP10.04□□□□□ -0.8
SCFD1-201ENST00000311943 ST3GAL4Q11206 333 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 RAB40BQ12829 278 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 IZUMO2Q6UXV1 221 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 C8orf59Q8N0T1 100 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-201ENST00000311943 FAM216BQ8N7L0 139 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 CELF2-AS1Q8N7Q2 184 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 FBLIM1Q8WUP2 373 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 HPS1Q92902 700 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 RFT1Q96AA3 541 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 METRNQ9UJH8 293 aa10.04□□□□□ -0.8
SCFD1-201ENST00000311943 ANXA2P2A6NMY6 339 aa10.03□□□□□ -0.8
SCFD1-201ENST00000311943 F5H0A9 414 aaPredicted RBP10.03□□□□□ -0.8
SCFD1-201ENST00000311943 FADS2O95864 444 aaKnown RBP10.03□□□□□ -0.8
SCFD1-201ENST00000311943 CFL1P23528 166 aaKnown RBP10.03□□□□□ -0.8
SCFD1-201ENST00000311943 CEACAM21Q3KPI0 293 aa10.03□□□□□ -0.8
SCFD1-201ENST00000311943 FAM76BQ5HYJ3 339 aa10.03□□□□□ -0.8
SCFD1-201ENST00000311943 TMEM42Q69YG0 159 aa10.03□□□□□ -0.8
SCFD1-201ENST00000311943 CRIP3Q6Q6R5 217 aa10.03□□□□□ -0.8
SCFD1-201ENST00000311943 FAM220AQ7Z4H9 259 aa10.03□□□□□ -0.8
SCFD1-201ENST00000311943 KLHL36Q8N4N3 616 aa10.03□□□□□ -0.8
SCFD1-201ENST00000311943 Q96MT0 163 aa10.03□□□□□ -0.8
SCFD1-201ENST00000311943 SLC22A4Q9H015 551 aa10.03□□□□□ -0.8
SCFD1-201ENST00000311943 ELL3Q9HB65 397 aaPredicted RBP10.03□□□□□ -0.8
SCFD1-201ENST00000311943 FGF20Q9NP95 211 aaPredicted RBP10.03□□□□□ -0.8
SCFD1-201ENST00000311943 IL36RNQ9UBH0 155 aa10.03□□□□□ -0.8
SCFD1-201ENST00000311943 MPC1Q9Y5U8 109 aa10.03□□□□□ -0.8
SCFD1-201ENST00000311943 A0A1B0GVI7 797 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 C22orf46C9J442 243 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 PTGES3LE9PB15 166 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 HTR1AP08908 422 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 IRF2P14316 349 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 HAAOP46952 286 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 SOX2P48431 317 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 ACTC1P68032 377 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 ACTA1P68133 377 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 SLC3A1Q07837 685 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 ALKBH1Q13686 389 aaKnown RBP10.02□□□□□ -0.8
SCFD1-201ENST00000311943 INSL4Q14641 139 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 ZNF181Q2M3W8 571 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 DOK3Q7L591 496 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 MICU1Q9BPX6 476 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 RTL8AQ9BWD3 113 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 BEX2Q9BXY8 128 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 TLNRD1Q9H1K6 362 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 C14orf119Q9NWQ9 140 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 DNAJB11Q9UBS4 358 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 OPN4Q9UHM6 478 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 ENPP5Q9UJA9 477 aa10.02□□□□□ -0.8
SCFD1-201ENST00000311943 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.02□□□□□ -0.81
SCFD1-201ENST00000311943 OOEPA6NGQ2 149 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 ACOD1A6NK06 481 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 H0YAE9 185 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms