RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 MLNRO43193 412 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 MAP2K3P46734 347 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 ZNF81P51508 661 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 CCL8P80075 99 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 RIPPLY1Q0D2K3 151 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 PLPP7Q8NBV4 271 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 TMEM106AQ96A25 262 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 SDHCQ99643 169 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-201ENST00000311487 PPIL3Q9H2H8 161 aaKnown RBP15.47■□□□□ 0.07
HMGA1-201ENST00000311487 MIXL1Q9H2W2 232 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 PFDN1O60925 122 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 MTRF1O75570 445 aaKnown RBP15.47■□□□□ 0.07
HMGA1-201ENST00000311487 ACHEP22303 614 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 CCL1P22362 96 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 SNRPD2P62316 118 aaKnown RBP15.47■□□□□ 0.07
HMGA1-201ENST00000311487 TRAM1Q15629 374 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 STEAP3Q658P3 488 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 C1orf174Q8IYL3 243 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 MINDY2Q8NBR6 621 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 GPR148Q8TDV2 347 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 TRAF4Q9BUZ4 470 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-201ENST00000311487 ZNF275Q9NSD4 429 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-201ENST00000311487 TMEM100Q9NV29 134 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 V9GYH0 126 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 ISPDA4D126 451 aa15.46■□□□□ 0.07
HMGA1-201ENST00000311487 ANKRD30BLA7E2S9 258 aa15.46■□□□□ 0.07
HMGA1-201ENST00000311487 CFL1P23528 166 aaKnown RBP15.46■□□□□ 0.07
HMGA1-201ENST00000311487 PRDX4Q13162 271 aa15.46■□□□□ 0.07
HMGA1-201ENST00000311487 EFNB3Q15768 340 aa15.46■□□□□ 0.07
HMGA1-201ENST00000311487 ACSM3Q53FZ2 586 aa15.46■□□□□ 0.07
HMGA1-201ENST00000311487 C11orf71Q6IPW1 123 aa15.46■□□□□ 0.07
HMGA1-201ENST00000311487 MOB3CQ70IA8 216 aa15.46■□□□□ 0.07
HMGA1-201ENST00000311487 TRMT10AQ8TBZ6 339 aaKnown RBP15.46■□□□□ 0.07
HMGA1-201ENST00000311487 ABCB9Q9NP78 766 aa15.46■□□□□ 0.07
HMGA1-201ENST00000311487 C3orf80F5H4A9 247 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 TPD52L2O43399 206 aaKnown RBP15.45■□□□□ 0.06
HMGA1-201ENST00000311487 NCR1O76036 304 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 GOSR1O95249 250 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 ZNF20P17024 532 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 TUBG1P23258 451 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 HOXA4Q00056 320 aaPredicted RBP15.45■□□□□ 0.06
HMGA1-201ENST00000311487 ASPHD2Q6ICH7 369 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 RNF144BQ7Z419 303 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 CEACAM19Q7Z692 300 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 TGIF2LYQ8IUE0 185 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 HAVCR2Q8TDQ0 301 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 AP3S1Q92572 193 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 PPP1R14BQ96C90 147 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 SPACA5Q96QH8 159 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 TUBG2Q9NRH3 451 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 SETXQ7Z333 2677 aaKnown RBP15.45■□□□□ 0.06
HMGA1-201ENST00000311487 NOTCH2Q04721 2471 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 GMDSO60547 372 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 SC5DO75845 299 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 IGHV1-46P01743 117 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 MTNR1BP49286 362 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 OR8G1Q15617 311 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 UBE2V2Q15819 145 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 YIF1BQ5BJH7 314 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 DTX2Q86UW9 622 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 OR13C9Q8NGT0 318 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 ELMOD3Q96FG2 381 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 ADAT1Q9BUB4 502 aaKnown RBP15.45■□□□□ 0.06
HMGA1-201ENST00000311487 FGF23Q9GZV9 251 aaPredicted RBP15.45■□□□□ 0.06
HMGA1-201ENST00000311487 OPA3Q9H6K4 179 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 TAS2R4Q9NYW5 299 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 ZNF391Q9UJN7 358 aa15.45■□□□□ 0.06
HMGA1-201ENST00000311487 ZNF816-ZNF321PA0A0X1KG74 233 aa15.44■□□□□ 0.06
HMGA1-201ENST00000311487 ZNF879B4DU55 563 aa15.44■□□□□ 0.06
HMGA1-201ENST00000311487 LYNX1G3V0Z9 82 aa15.44■□□□□ 0.06
HMGA1-201ENST00000311487 NRASP01111 189 aa15.44■□□□□ 0.06
HMGA1-201ENST00000311487 LYNX1P0DP58 116 aa15.44■□□□□ 0.06
HMGA1-201ENST00000311487 DDI2Q5TDH0 399 aa15.44■□□□□ 0.06
HMGA1-201ENST00000311487 PLCXD3Q63HM9 321 aa15.44■□□□□ 0.06
HMGA1-201ENST00000311487 OR51A2Q8NGJ7 313 aa15.44■□□□□ 0.06
HMGA1-201ENST00000311487 PIGTQ969N2 578 aa15.44■□□□□ 0.06
HMGA1-201ENST00000311487 SORCS2Q96PQ0 1159 aa15.44■□□□□ 0.06
HMGA1-201ENST00000311487 CCDC32Q9BV29 185 aa15.44■□□□□ 0.06
HMGA1-201ENST00000311487 NOX4Q9NPH5 578 aa15.44■□□□□ 0.06
HMGA1-201ENST00000311487 LOC390937A0A1W2PQ73 354 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 C17orf100A8MU93 164 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 PIN1P1O15428 100 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 CDC14BO60729 498 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 GPM6AP51674 278 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 ZNF79Q15937 498 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 Q499Y3 187 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 OR13G1Q8NGZ3 307 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 OR8S1Q8NH09 359 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 UFSP2Q9NUQ7 469 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 MRPL15Q9P015 296 aaKnown RBP15.43■□□□□ 0.06
HMGA1-201ENST00000311487 ANKRD17O75179 2603 aaKnown RBP15.43■□□□□ 0.06
HMGA1-201ENST00000311487 ARID1AO14497 2285 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 NAV2Q8IVL1 2488 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 TRAV8-7A0A075B6U6 113 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 TRBV5-5A0A0J9YX44 114 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 FAM230AA0A1W2PPH8 454 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 GRPP07492 148 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 THBS2P35442 1172 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 EVX1P49640 407 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 MAB21L1Q13394 359 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms