RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 TMEM99Q8N816 258 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 OR56B1Q8NGI3 324 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 GGACTQ9BVM4 153 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 FSCN3Q9NQT6 498 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 TP53TG5Q9Y2B4 290 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 U3KQA8 63 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 FAM186AA6NE01 2351 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 A0A0G2JMP0 313 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 DHRS7CA6NNS2 312 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 H3BMH7 237 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 TGFBR3LH3BV60 316 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 J3QR89 54 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 TFP02787 698 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 FABP4P15090 132 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 SRMP19623 302 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 ALOX5APP20292 161 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 SRP9P49458 86 aaKnown RBP5.34□□□□□ -1.56
SEC22A-201ENST00000309934 HCCSP53701 268 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 TAS2R31P59538 309 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 ROM1Q03395 351 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 KCNMB1Q16558 191 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 CTF1Q16619 201 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 DMKNQ6E0U4 476 aaPredicted RBP5.34□□□□□ -1.56
SEC22A-201ENST00000309934 HIST2H3AQ71DI3 136 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 TSEN54Q7Z6J9 526 aaKnown RBP5.34□□□□□ -1.56
SEC22A-201ENST00000309934 GHDCQ8N2G8 530 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 ASB13Q8WXK3 278 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 RPL3LQ92901 407 aaKnown RBP5.34□□□□□ -1.56
SEC22A-201ENST00000309934 MUCL1Q96DR8 90 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 BORCS8Q96FH0 119 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 OR2M2Q96R28 347 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 ATF6BQ99941 703 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 MICU1Q9BPX6 476 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 NMNAT2Q9BZQ4 307 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 DNAJC4Q9NNZ3 241 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 GPR173Q9NS66 373 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 DNAJB11Q9UBS4 358 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 MEMO1Q9Y316 297 aa5.34□□□□□ -1.56
SEC22A-201ENST00000309934 THADAQ6YHU6 1953 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 LOC100289279A0A1B0GTE1 492 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 A0A1W2PPH5 198 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 DCDC2BA2VCK2 349 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 CCSO14618 274 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 SELENOFO60613 162 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 LCATP04180 440 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 SERPINA2P20848 420 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 TNFSF4P23510 183 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 TNFSF8P32971 234 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 SLC22A6Q4U2R8 563 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 FAM219BQ5XKK7 198 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 LINC00346Q8IVM7 164 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 ZSCAN4Q8NAM6 433 aaPredicted RBP5.33□□□□□ -1.56
SEC22A-201ENST00000309934 CHST4Q8NCG5 386 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 OR10J5Q8NHC4 309 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 PRR7Q8TB68 274 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 SPSB1Q96BD6 273 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 OR11A1Q9GZK7 315 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 PLK3Q9H4B4 646 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 MED20Q9H944 212 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 UBTD1Q9HAC8 227 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.33□□□□□ -1.567e-11■■■■■ 35.1
SEC22A-201ENST00000309934 ZNF107Q9UII5 783 aaPredicted RBP5.33□□□□□ -1.56
SEC22A-201ENST00000309934 PROCRQ9UNN8 238 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 AMDHD2Q9Y303 409 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 ADAM18Q9Y3Q7 739 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 BRCA2P51587 3418 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 A6NJY4 79 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 AHRRA9YTQ3 701 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 TMEM238C9JI98 176 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 M0R129 80 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 CXCL13O43927 109 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 LYPD3O95274 346 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 CLPSP04118 112 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 EPHA2P29317 976 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 PRSS3P35030 304 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 OR3A2P47893 321 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 HTR5AP47898 357 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 PMPCAQ10713 525 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 ATXN7L3Q14CW9 347 aaPredicted RBP5.33□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF684Q5T5D7 378 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 GSG1LQ6UXU4 331 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 SLC16A12Q6ZSM3 486 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 LHFPL2Q6ZUX7 228 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 ADGRE4PQ86SQ3 457 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 PIP4P1Q86T03 277 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 YRDCQ86U90 279 aaKnown RBP5.33□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF584Q8IVC4 421 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF519Q8TB69 540 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 GMPPAQ96IJ6 420 aaPredicted RBP5.33□□□□□ -1.56
SEC22A-201ENST00000309934 SLC5A7Q9GZV3 580 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 PIGMQ9H3S5 423 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 CHCHD2Q9Y6H1 151 aaPredicted RBP5.33□□□□□ -1.56
SEC22A-201ENST00000309934 TRAV34A0A0B4J273 112 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 AGPAT2O15120 278 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 IL2RAP01589 272 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 GYPBP06028 91 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 UMODP07911 640 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 OR8U8P0C7N1 319 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 HTR2CP28335 458 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 RPL23AP62750 156 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms