RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 CDC6Q99741 560 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 ULBP2Q9BZM5 246 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 RAB18Q9NP72 206 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 GLS2Q9UI32 602 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 PCDHGA1Q9Y5H4 931 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 WDR87Q6ZQQ6 2873 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 A0A0G2JMM0 328 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 A0A1W2PPB8 328 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 A0A1W2PRS3 328 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 CCDC85CA6NKD9 419 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 MPTX1A8MV57 137 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 KIR3DP1A8MWS1 328 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 C9J4A7 227 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 TRIM77I1YAP6 450 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 GLRA1P23415 457 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 B3GALT5-AS1P59052 145 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 TAS2R46P59540 309 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 ZFP36L1Q07352 338 aaKnown RBP13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 ZNF273Q14593 569 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 SNAI3Q3KNW1 292 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 Q7L0L9 218 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 RPS19BP1Q86WX3 136 aaKnown RBP13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 MAML2Q8IZL2 1156 aaPredicted RBP13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 AGBL5Q8NDL9 886 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 OR2Y1Q8NGV0 311 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 MAFAQ8NHW3 353 aaPredicted RBP13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 STOML3Q8TAV4 291 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 HAS2Q92819 552 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 LDAHQ9H6V9 325 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 CYTL1Q9NRR1 136 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 EHFQ9NZC4 300 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 IGKV1D-8A0A087WSZ0 117 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 MSTNO14793 375 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 TDGF1P13385 188 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 CRYGSP22914 178 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 HOXA6P31267 233 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 OR3A2P47893 321 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 RAC1P63000 192 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 CYCSP99999 105 aaKnown RBP13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 MC2RQ01718 297 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 WDR5BQ86VZ2 330 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 TMEM156Q8N614 296 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 RHBDD1Q8TEB9 315 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 SGK3Q96BR1 496 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 ZNF775Q96BV0 537 aaPredicted RBP13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 SCGB3A2Q96PL1 93 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 PIGQQ9BRB3 760 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 GPR173Q9NS66 373 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 PLEK2Q9NYT0 353 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 TAS2R3Q9NYW6 316 aa13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 MCTS1Q9ULC4 181 aaKnown RBP13.3□□□□□ -0.28
SPIRE1-201ENST00000309836 CCDC163A0A0D9SF12 145 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 MSGN1A6NI15 193 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 PATE3B3GLJ2 98 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 YKT6O15498 198 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 FGF16O43320 207 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 LYL1P12980 280 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 ATF4P18848 351 aaPredicted RBP13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 ACKR3P25106 362 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 ZNF84P51523 738 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 MRPS34P82930 218 aaKnown RBP13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 HGFACQ04756 655 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 NSUN5P2Q63ZY6 315 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 TMEM17Q86X19 198 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 POC1AQ8NBT0 407 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 OR52H1Q8NGJ2 320 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 OR1S2Q8NGQ3 325 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 INTS12Q96CB8 462 aaKnown RBP13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 OR10C1Q96KK4 312 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 ELL3Q9HB65 397 aaPredicted RBP13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 HPF1Q9NWY4 346 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 OR5AC2Q9NZP5 309 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 NSG1A0A0A6YYJ2 146 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 FIGNL2A6NMB9 653 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 SERPINE3A8MV23 424 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 CA11O75493 328 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 APOC3P02656 99 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 NTF4P34130 210 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 FAM27BQ5VT28 67 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 C6orf201Q7Z4U5 140 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 CCDC54Q8NEL0 328 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 SPTSSAQ969W0 71 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 C10orf35Q96D05 121 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 ASF1BQ9NVP2 202 aa13.29□□□□□ -0.28
SPIRE1-201ENST00000309836 CDK2AP1O14519 115 aa13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 NUPL2O15504 423 aaKnown RBP13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 CBR3O75828 277 aa13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 CPT2P23786 658 aa13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 PTGER4P35408 488 aa13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 TRA2AQ13595 282 aaKnown RBP eCLIP13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 RAB35Q15286 201 aa13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 CHRFAM7AQ494W8 412 aa13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 PRSS54Q6PEW0 395 aa13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 FAM219AQ8IW50 185 aa13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 BOLLQ8N9W6 283 aaKnown RBP13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 SLC30A7Q8NEW0 376 aa13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 OR2AE1Q8NHA4 323 aa13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 Q96M66 194 aa13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 HDHD3Q9BSH5 251 aaPredicted RBP13.28□□□□□ -0.28
SPIRE1-201ENST00000309836 PCDHB10Q9UN67 800 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms