RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 ZNF154Q13106 437 aa18.85■□□□□ 0.61
HOXD4-201ENST00000306324 SVOPQ8N4V2 548 aa18.85■□□□□ 0.61
HOXD4-201ENST00000306324 OR5A2Q8NGI9 324 aa18.85■□□□□ 0.61
HOXD4-201ENST00000306324 OR13C5Q8NGS8 318 aa18.85■□□□□ 0.61
HOXD4-201ENST00000306324 NPRL2Q8WTW4 380 aa18.85■□□□□ 0.61
HOXD4-201ENST00000306324 PP6455Q8WZ26 134 aa18.85■□□□□ 0.61
HOXD4-201ENST00000306324 ERGIC1Q969X5 290 aa18.85■□□□□ 0.61
HOXD4-201ENST00000306324 ACOT13Q9NPJ3 140 aa18.85■□□□□ 0.61
HOXD4-201ENST00000306324 RNF223E7ERA6 249 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 PTBP3O95758 552 aaKnown RBP18.84■□□□□ 0.61
HOXD4-201ENST00000306324 CYB5R3P00387 301 aaPredicted RBP18.84■□□□□ 0.61
HOXD4-201ENST00000306324 OCM2P0CE71 109 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 IRF2P14316 349 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 PMELP40967 661 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 NR4A2P43354 598 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 CHN2P52757 468 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 GNG3P63215 75 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 EMX1Q04741 257 aaPredicted RBP18.84■□□□□ 0.61
HOXD4-201ENST00000306324 UBE2V2Q15819 145 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 KCTD21Q4G0X4 260 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 SPARTQ8N0X7 666 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 OR11L1Q8NGX0 322 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 TRMT10AQ8TBZ6 339 aaKnown RBP18.84■□□□□ 0.61
HOXD4-201ENST00000306324 C1orf123Q9NWV4 160 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 YLPM1P49750 1951 aaKnown RBP18.84■□□□□ 0.61
HOXD4-201ENST00000306324 hCG_1807616A0A1W2PRN6 198 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 OR5B21A6NL26 309 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 TMEM210A6NLX4 147 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 LRRC30A6NM36 301 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 VWC2LB2RUY7 222 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 IFNL4K9M1U5 179 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 YIF1BQ5BJH7 314 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 AVPI1Q5T686 147 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 ZNF773Q6PK81 442 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 ZNF826PQ6ZT77 177 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 PEG10Q86TG7 708 aaKnown RBP18.84■□□□□ 0.61
HOXD4-201ENST00000306324 UFD1Q92890 307 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 HPS1Q92902 700 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 TIMD4Q96H15 378 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 REG4Q9BYZ8 158 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 SLC7A11Q9UPY5 501 aa18.84■□□□□ 0.61
HOXD4-201ENST00000306324 ACANP16112 2415 aa18.83■□□□□ 0.61
HOXD4-201ENST00000306324 FAM230AA0A1W2PPH8 454 aa18.83■□□□□ 0.6
HOXD4-201ENST00000306324 H7C1Q1 480 aa18.83■□□□□ 0.6
HOXD4-201ENST00000306324 CD2P06729 351 aa18.83■□□□□ 0.6
HOXD4-201ENST00000306324 CNN3Q15417 329 aaKnown RBP18.83■□□□□ 0.6
HOXD4-201ENST00000306324 LIPKQ5VXJ0 399 aa18.83■□□□□ 0.6
HOXD4-201ENST00000306324 ZNF367Q7RTV3 350 aa18.83■□□□□ 0.6
HOXD4-201ENST00000306324 SERPINA12Q8IW75 414 aa18.83■□□□□ 0.6
HOXD4-201ENST00000306324 Q8TCH9 128 aa18.83■□□□□ 0.6
HOXD4-201ENST00000306324 RPL3LQ92901 407 aaKnown RBP18.83■□□□□ 0.6
HOXD4-201ENST00000306324 RAB1CQ92928 201 aa18.83■□□□□ 0.6
HOXD4-201ENST00000306324 TECTBQ96PL2 329 aa18.83■□□□□ 0.6
HOXD4-201ENST00000306324 MGLLQ99685 303 aa18.83■□□□□ 0.6
HOXD4-201ENST00000306324 TMEM178BH3BS89 294 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 CDIPTO14735 213 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 TNFAIP8O95379 198 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 CD1AP06126 327 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 OCMP0CE72 109 aaPredicted RBP18.82■□□□□ 0.6
HOXD4-201ENST00000306324 MLLT11Q13015 90 aaPredicted RBP18.82■□□□□ 0.6
HOXD4-201ENST00000306324 ZNF181Q2M3W8 571 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 UTS2BQ765I0 119 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 C1orf87Q8N0U7 546 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 CIARTQ8N365 385 aaPredicted RBP18.82■□□□□ 0.6
HOXD4-201ENST00000306324 PARP16Q8N5Y8 322 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 SCCPDHQ8NBX0 429 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 MAPK1IP1LQ8NDC0 245 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 OR13C9Q8NGT0 318 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 TMEM106AQ96A25 262 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 NARFLQ9H6Q4 476 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 ISYNA1Q9NPH2 558 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 RNF7Q9UBF6 113 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 WIPI2Q9Y4P8 454 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 NPTNQ9Y639 398 aa18.82■□□□□ 0.6
HOXD4-201ENST00000306324 HIVEP1P15822 2718 aa18.81■□□□□ 0.6
HOXD4-201ENST00000306324 ISPDA4D126 451 aa18.81■□□□□ 0.6
HOXD4-201ENST00000306324 LRP5LA4QPB2 252 aa18.81■□□□□ 0.6
HOXD4-201ENST00000306324 SMAD7O15105 426 aaKnown RBP18.81■□□□□ 0.6
HOXD4-201ENST00000306324 RPS11P62280 158 aaKnown RBP eCLIP18.81■□□□□ 0.6
HOXD4-201ENST00000306324 Q499Y3 187 aa18.81■□□□□ 0.6
HOXD4-201ENST00000306324 FAM76BQ5HYJ3 339 aa18.81■□□□□ 0.6
HOXD4-201ENST00000306324 C11orf53Q8IXP5 236 aa18.81■□□□□ 0.6
HOXD4-201ENST00000306324 BOLLQ8N9W6 283 aaKnown RBP18.81■□□□□ 0.6
HOXD4-201ENST00000306324 OR5D14Q8NGL3 314 aa18.81■□□□□ 0.6
HOXD4-201ENST00000306324 OPALINQ96PE5 141 aa18.81■□□□□ 0.6
HOXD4-201ENST00000306324 TMED9Q9BVK6 235 aa18.81■□□□□ 0.6
HOXD4-201ENST00000306324 ZCCHC4Q9H5U6 513 aa18.81■□□□□ 0.6
HOXD4-201ENST00000306324 MED13LQ71F56 2210 aa18.81■□□□□ 0.6
HOXD4-201ENST00000306324 ZANQ9Y493 2812 aa18.8■□□□□ 0.6
HOXD4-201ENST00000306324 TRBV5-5A0A0J9YX44 114 aa18.8■□□□□ 0.6
HOXD4-201ENST00000306324 PQLC2LA1A4F0 135 aa18.8■□□□□ 0.6
HOXD4-201ENST00000306324 ZNF205O95201 554 aa18.8■□□□□ 0.6
HOXD4-201ENST00000306324 ATF1P18846 271 aa18.8■□□□□ 0.6
HOXD4-201ENST00000306324 FUT6P51993 359 aa18.8■□□□□ 0.6
HOXD4-201ENST00000306324 FAM201AQ5SY85 155 aa18.8■□□□□ 0.6
HOXD4-201ENST00000306324 BORCS8Q96FH0 119 aa18.8■□□□□ 0.6
HOXD4-201ENST00000306324 OR14A2Q96R54 314 aa18.8■□□□□ 0.6
HOXD4-201ENST00000306324 TLNRD1Q9H1K6 362 aa18.8■□□□□ 0.6
HOXD4-201ENST00000306324 OR51I2Q9H344 312 aa18.8■□□□□ 0.6
HOXD4-201ENST00000306324 IGHV4-61A0A0C4DH41 118 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms