RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 NEURL1O76050 574 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 UCP2P55851 309 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 PRSS35Q8N3Z0 413 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 C17orf78Q8N4C9 275 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 OR8B12Q8NGG6 310 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 MSI2Q96DH6 328 aaKnown RBP8.13□□□□□ -1.11
PTPRE-202ENST00000306042 AIFM2Q9BRQ8 373 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 FOXJ3Q9UPW0 622 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 LSM5Q9Y4Y9 91 aaKnown RBP8.13□□□□□ -1.11
PTPRE-202ENST00000306042 C17orf51A8MQB3 221 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 E9PLN8 166 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 ZNHIT1O43257 154 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 ADRA2AP08913 450 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 ZNF708P17019 499 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 RPS4Y1P22090 263 aaKnown RBP8.13□□□□□ -1.11
PTPRE-202ENST00000306042 TGM1P22735 817 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 AGTR1P30556 359 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 SPCS2Q15005 226 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 HACD4Q5VWC8 232 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 BEST4Q8NFU0 473 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 ZNF418Q8TF45 676 aaPredicted RBP8.13□□□□□ -1.11
PTPRE-202ENST00000306042 DVL3Q92997 716 aaPredicted RBP8.13□□□□□ -1.11
PTPRE-202ENST00000306042 ARL11Q969Q4 196 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 WBP1Q96G27 269 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 VKORC1Q9BQB6 163 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 PRSS27Q9BQR3 290 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 MESP1Q9BRJ9 268 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 LPAR2Q9HBW0 351 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 A0A1W2PNV4 684 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 ATP6V1G2-DDX39BF2Z307 99 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 ARPC1BO15143 372 aaKnown RBP8.13□□□□□ -1.11
PTPRE-202ENST00000306042 CLDN14O95500 239 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 TBX6O95947 436 aaPredicted RBP8.13□□□□□ -1.11
PTPRE-202ENST00000306042 OR4A8P0C604 315 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 FAM27E3Q08E93 113 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 RTL8BQ17RB0 113 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 VWA1Q6PCB0 445 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 SLC26A10Q8NG04 563 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 SGK3Q96BR1 496 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 UPRTQ96BW1 309 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 GALMQ96C23 342 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 ORAI1Q96D31 301 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 MED30Q96HR3 178 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 CCL19Q99731 98 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 PLEKHF2Q9H8W4 249 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 ANAPC1Q9H1A4 1944 aa8.13□□□□□ -1.11
PTPRE-202ENST00000306042 ZSCAN5BA6NJL1 495 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 MT-ND4P03905 459 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 FUT3P21217 361 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 NR4A2P43354 598 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 LUMP51884 338 aaPredicted RBP8.12□□□□□ -1.11
PTPRE-202ENST00000306042 TPBGQ13641 420 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 C4orf17Q53FE4 359 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 C1QTNF12Q5T7M4 302 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 OR10K2Q6IF99 312 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 C8orf82Q6P1X6 216 aaPredicted RBP8.12□□□□□ -1.11
PTPRE-202ENST00000306042 OR13F1Q8NGS4 319 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 ZNF519Q8TB69 540 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 GAL3ST2Q9H3Q3 398 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 RDH8Q9NYR8 311 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 CLN8Q9UBY8 286 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 MDC1Q14676 2089 aaKnown RBP8.12□□□□□ -1.11
PTPRE-202ENST00000306042 DSPPQ9NZW4 1301 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 LY6G6EA0A0G2JKS1 128 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 OR5H1A6NKK0 313 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 ZIC3O60481 467 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 SLC22A5O76082 557 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 PMP2P02689 132 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 IFNA4P05014 189 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 SUCLG1P53597 346 aaKnown RBP8.12□□□□□ -1.11
PTPRE-202ENST00000306042 LSM11P83369 360 aaKnown RBP eCLIP8.12□□□□□ -1.11
PTPRE-202ENST00000306042 C2orf76Q3KRA6 126 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 AADACL4Q5VUY2 407 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 NSUN5P2Q63ZY6 315 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 IDO2Q6ZQW0 420 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 SKA3Q8IX90 412 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 OR8H1Q8NGG4 311 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 NAA50Q9GZZ1 169 aaKnown RBP8.12□□□□□ -1.11
PTPRE-202ENST00000306042 U3KQA8 63 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 LTBP2Q14767 1821 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 TRIM64BA6NI03 449 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 IFITM5A6NNB3 132 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 HSD17B6O14756 317 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 ZFPL1O95159 310 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 ZNF205O95201 554 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 NGFP01138 241 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 GDNFP39905 211 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 HOXA1P49639 335 aaPredicted RBP8.12□□□□□ -1.11
PTPRE-202ENST00000306042 RPL23AP62750 156 aaKnown RBP8.12□□□□□ -1.11
PTPRE-202ENST00000306042 PSG4Q00888 419 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 FGL1Q08830 312 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 MS4A3Q96HJ5 214 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 MRPS18CQ9Y3D5 142 aaKnown RBP8.12□□□□□ -1.11
PTPRE-202ENST00000306042 CDIPTO14735 213 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 PGA4P0DJD7 388 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 PGA3P0DJD8 388 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 COX7A1P24310 79 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 DSCR9P59020 149 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 RPS16P62249 146 aaKnown RBP8.12□□□□□ -1.11
PTPRE-202ENST00000306042 FOXO1Q12778 655 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms