RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 AZGP1P25311 298 aaKnown RBP8.03□□□□□ -1.12
RFX3-201ENST00000302303 GNALP38405 381 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 CDKN1AP38936 164 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 OR10A3P58181 314 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 SELENOVP59797 346 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 ZP1P60852 638 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 VBP1P61758 197 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 LSM3P62310 102 aaKnown RBP8.03□□□□□ -1.12
RFX3-201ENST00000302303 CCL8P80075 99 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 ZNF154Q13106 437 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 MOGQ16653 247 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 HSD17B12Q53GQ0 312 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 FAM166AQ6J272 317 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 C20orf204Q6ZNR8 217 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 C1QL2Q7Z5L3 287 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 CLVS1Q8IUQ0 354 aaPredicted RBP8.03□□□□□ -1.12
RFX3-201ENST00000302303 ZDHHC23Q8IYP9 409 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 DNAAF1Q8NEP3 725 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 ELMOD3Q96FG2 381 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 MEGF10Q96KG7 1140 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 ADAT1Q9BUB4 502 aaKnown RBP8.03□□□□□ -1.12
RFX3-201ENST00000302303 SLC22A4Q9H015 551 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 TLNRD1Q9H1K6 362 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 OR51I2Q9H344 312 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 MS4A5Q9H3V2 200 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 PLEKHA1Q9HB21 404 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 CYSLTR2Q9NS75 346 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 ZNF701Q9NV72 531 aaPredicted RBP8.03□□□□□ -1.12
RFX3-201ENST00000302303 IL19Q9UHD0 177 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 ZDHHC8Q9ULC8 765 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 SSR3Q9UNL2 185 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 CACNA1DQ01668 2161 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 SPG11Q96JI7 2443 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 ITPR2Q14571 2701 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 IGKV1-12A0A0C4DH73 117 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 LOC100506127A0A0U1RQW1 187 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 PLSCR5A0PG75 271 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 ZNF732B4DXR9 585 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 LY6HO94772 140 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 IGKV1D-12P01611 117 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 MAS1P04201 325 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 RAB3AP20336 220 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 MAPK3P27361 379 aaPredicted RBP8.02□□□□□ -1.13
RFX3-201ENST00000302303 SDC2P34741 201 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 RPS19P39019 145 aaKnown RBP8.02□□□□□ -1.13
RFX3-201ENST00000302303 GATA4P43694 442 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 GPM6AP51674 278 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 TMBIM6P55061 237 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 SNRPD2P62316 118 aaKnown RBP8.02□□□□□ -1.13
RFX3-201ENST00000302303 SPCS2Q15005 226 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 OR8G1Q15617 311 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 FAM209AQ5JX71 171 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 PRAMEF6Q5VXH4 476 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 PLCXD3Q63HM9 321 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 PAMR1Q6UXH9 720 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 ANGPTL5Q86XS5 388 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 CELF2-AS1Q8N7Q2 184 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 TRMT10AQ8TBZ6 339 aaKnown RBP8.02□□□□□ -1.13
RFX3-201ENST00000302303 NPRL2Q8WTW4 380 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 ITLN1Q8WWA0 313 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 SLC25A28Q96A46 364 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 RNF170Q96K19 258 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 C1orf147Q96MC9 270 aaPredicted RBP8.02□□□□□ -1.13
RFX3-201ENST00000302303 OR2V2Q96R30 315 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 CXXC4Q9H2H0 198 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 GCM1Q9NP62 436 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 EXOSC4Q9NPD3 245 aaKnown RBP8.02□□□□□ -1.13
RFX3-201ENST00000302303 TMEM138Q9NPI0 162 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 SNTG1Q9NSN8 517 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 FAIMQ9NVQ4 179 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 DCAF16Q9NXF7 216 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 CACNG2Q9Y698 323 aa8.02□□□□□ -1.13
RFX3-201ENST00000302303 ABCA12Q86UK0 2595 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 USF3Q68DE3 2245 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 POLQO75417 2590 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 H3BMQ9 156 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 RHBDL1O75783 438 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 ARL6IP5O75915 188 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 PAX1P15863 534 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 COL8A2P25067 703 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 MPZP25189 248 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 BDKRB2P30411 391 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 MTNR1BP49286 362 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 FUT6P51993 359 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 CAV3P56539 151 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 GNG3P63215 75 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 TNFAIP6P98066 277 aaPredicted RBP8.01□□□□□ -1.13
RFX3-201ENST00000302303 KISS1Q15726 138 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 C1orf100Q5SVJ3 147 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 ASCL4Q6XD76 172 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 ZNF826PQ6ZT77 177 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 FTMTQ8N4E7 242 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 SCCPDHQ8NBX0 429 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 OR4D6Q8NGJ1 314 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 NDNFQ8TB73 568 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 THRSPQ92748 146 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 YIPF5Q969M3 257 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 SPSB1Q96BD6 273 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 ISOC1Q96CN7 298 aa8.01□□□□□ -1.13
RFX3-201ENST00000302303 KCTD7Q96MP8 289 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms