RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 CRIM1Q9NZV1 1036 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 C7orf66A4D0T2 115 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 TOXO94900 526 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 ZNF14P17017 642 aaPredicted RBP19.24■□□□□ 0.67
SMAD1-201ENST00000302085 SERPINA2P20848 420 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 FAUP35544 74 aaKnown RBP19.24■□□□□ 0.67
SMAD1-201ENST00000302085 RBP2P50120 134 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 UBE2NP61088 152 aaKnown RBP19.24■□□□□ 0.67
SMAD1-201ENST00000302085 ATAD3CQ5T2N8 411 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 LHFPL2Q6ZUX7 228 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 MRPL21Q7Z2W9 205 aaKnown RBP19.24■□□□□ 0.67
SMAD1-201ENST00000302085 CCDC36Q8IYA8 594 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 OR51T1Q8NGJ9 327 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 STARD4Q96DR4 205 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 WBP1Q96G27 269 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 CYYR1Q96J86 154 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 ACTR6Q9GZN1 396 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 OR10A4Q9H209 315 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 KCNK7Q9Y2U2 307 aa19.24■□□□□ 0.67
SMAD1-201ENST00000302085 ZNF850A8MQ14 1090 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 CGAP01215 116 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 CELA3BP08861 270 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 FUT6P51993 359 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 PLCXD3Q63HM9 321 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 STEAP1BQ6NZ63 245 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 ASCL4Q6XD76 172 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 MYPOPQ86VE0 399 aaPredicted RBP19.23■□□□□ 0.67
SMAD1-201ENST00000302085 OR56B1Q8NGI3 324 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 NUDCD2Q8WVJ2 157 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 EXTL1Q92935 676 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 RAB3CQ96E17 227 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 ELL3Q9HB65 397 aaPredicted RBP19.23■□□□□ 0.67
SMAD1-201ENST00000302085 SLC7A11Q9UPY5 501 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 ACACAQ13085 2346 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 SVILO95425 2214 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 FOXI3A8MTJ6 420 aaPredicted RBP19.23■□□□□ 0.67
SMAD1-201ENST00000302085 SPRY1O43609 319 aaPredicted RBP19.23■□□□□ 0.67
SMAD1-201ENST00000302085 ANGPTL7O43827 346 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 SSX5O60225 188 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 COX5AP20674 150 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 TAS2R19P59542 299 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 SF3B4Q15427 424 aaKnown RBP eCLIP19.23■□□□□ 0.67
SMAD1-201ENST00000302085 FAM189A2Q15884 450 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 TRAPPC6BQ86SZ2 158 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 ZNF610Q8N9Z0 462 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 GPR160Q9UJ42 338 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 FAM215AQ9Y5M1 114 aa19.23■□□□□ 0.67
SMAD1-201ENST00000302085 NDUFB6O95139 128 aa19.22■□□□□ 0.67
SMAD1-201ENST00000302085 TPOP07202 933 aa19.22■□□□□ 0.67
SMAD1-201ENST00000302085 HIST1H1DP16402 221 aaKnown RBP19.22■□□□□ 0.67
SMAD1-201ENST00000302085 ATP1B3P54709 279 aa19.22■□□□□ 0.67
SMAD1-201ENST00000302085 PER3P56645 1201 aa19.22■□□□□ 0.67
SMAD1-201ENST00000302085 RRAS2P62070 204 aaPredicted RBP19.22■□□□□ 0.67
SMAD1-201ENST00000302085 KRTCAP3Q53RY4 240 aa19.22■□□□□ 0.67
SMAD1-201ENST00000302085 ZNF324BQ6AW86 544 aaPredicted RBP19.22■□□□□ 0.67
SMAD1-201ENST00000302085 ZNF782Q6ZMW2 699 aaPredicted RBP19.22■□□□□ 0.67
SMAD1-201ENST00000302085 BOD1Q96IK1 185 aa19.22■□□□□ 0.67
SMAD1-201ENST00000302085 TECTBQ96PL2 329 aa19.22■□□□□ 0.67
SMAD1-201ENST00000302085 TM2D1Q9BX74 207 aa19.22■□□□□ 0.67
SMAD1-201ENST00000302085 METTL9Q9H1A3 318 aa19.22■□□□□ 0.67
SMAD1-201ENST00000302085 TP63Q9H3D4 680 aaPredicted RBP19.22■□□□□ 0.67
SMAD1-201ENST00000302085 ZNF221Q9UK13 617 aa19.22■□□□□ 0.67
SMAD1-201ENST00000302085 PRRC2CQ9Y520 2896 aaKnown RBP19.22■□□□□ 0.67
SMAD1-201ENST00000302085 RFPL4BQ6ZWI9 263 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 WDR31Q8NA23 367 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 STEAP2Q8NFT2 490 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 CPNE2Q96FN4 548 aaPredicted RBP19.21■□□□□ 0.67
SMAD1-201ENST00000302085 ARHGAP5-AS1Q96IT6 56 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 BEX2Q9BXY8 128 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 OPN3Q9H1Y3 402 aaPredicted RBP19.21■□□□□ 0.67
SMAD1-201ENST00000302085 BEX1Q9HBH7 125 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 ZNF107Q9UII5 783 aaPredicted RBP19.21■□□□□ 0.67
SMAD1-201ENST00000302085 POU2F3Q9UKI9 436 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 CACNA1GO43497 2377 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 ARPC1BO15143 372 aaKnown RBP19.21■□□□□ 0.67
SMAD1-201ENST00000302085 ICMTO60725 284 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 PLATP00750 562 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 CD74P04233 296 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 GSTP1P09211 210 aaKnown RBP19.21■□□□□ 0.67
SMAD1-201ENST00000302085 HOXB1P14653 301 aaPredicted RBP19.21■□□□□ 0.67
SMAD1-201ENST00000302085 FAM180AQ6UWF9 173 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 GVQW1Q8N7I0 195 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 OR4S1Q8NGB4 309 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 OR51S1Q8NGJ8 323 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 OR51B6Q9H340 312 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 RANGRFQ9HD47 186 aaPredicted RBP19.21■□□□□ 0.67
SMAD1-201ENST00000302085 PROCRQ9UNN8 238 aa19.21■□□□□ 0.67
SMAD1-201ENST00000302085 IGKV1-12A0A0C4DH73 117 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 RRP8O43159 456 aaKnown RBP19.2■□□□□ 0.66
SMAD1-201ENST00000302085 WDR1O75083 606 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 PEX14O75381 377 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 RAB3DO95716 219 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 CYB5AP00167 134 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 CST4P01036 141 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 IGKV1D-12P01611 117 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 RCVRNP35243 200 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 PRDX4Q13162 271 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 TBC1D28Q2M2D7 210 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 C1orf185Q5T7R7 199 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 RPRMLQ8N4K4 120 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms