RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 IL20Q9NYY1 176 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 A0A0B4J293 547 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 PRLHRP49683 370 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 C10orf126Q8N4M7 172 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 PIPOXQ9P0Z9 390 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 TMEM272A0A1B0GTI8 110 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 CTAG1AP78358 180 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 ERV3-1Q14264 604 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 B3GAT1Q9P2W7 334 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 MPV17LQ2QL34 196 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 OR5AS1Q8N127 324 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 WDR61Q9GZS3 305 aaKnown RBP10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 ZNF217O75362 1048 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 RAB32Q13637 225 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 TAS1R1Q7RTX1 841 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 TECRQ9NZ01 308 aaKnown RBP10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 C9orf170A2RU37 121 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 NDUFB7P17568 137 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 SLC38A11Q08AI6 406 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 Q6ZSR9 355 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 CDK5R1Q15078 307 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 TMEM128Q5BJH2 165 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 NXPE3Q969Y0 559 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 CRYAAP02489 173 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 HOXB2P14652 356 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 ZNF816Q0VGE8 651 aaPredicted RBP10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 ZNF750Q32MQ0 723 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 DCBLD2Q96PD2 775 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 JAM3Q9BX67 310 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 ZNF253O75346 499 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 CD14P08571 375 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 ZXDAP98168 799 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 FZD2Q14332 565 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 SPINK9Q5DT21 86 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 USP53Q70EK8 1073 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 ADAMTS5Q9UNA0 930 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 SRPK3Q9UPE1 567 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 MON2Q7Z3U7 1717 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 C11orf94C9JXX5 98 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 KLHDC7BQ96G42 594 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 GMPPAQ96IJ6 420 aaPredicted RBP10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 TRAV1-2A0A0B4J238 106 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 HNRNPA1P09651 372 aaKnown RBP eCLIP10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 CSNK1G2P78368 415 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 C1orf61Q13536 156 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 HNRNPA1L2Q32P51 320 aaKnown RBP10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 ACER2Q5QJU3 275 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 OR10G8Q8NGN5 311 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 SERINC4A6NH21 518 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 TRGC2P03986 189 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 TMEM164Q5U3C3 297 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 RNF165Q6ZSG1 346 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 SLC45A2Q9UMX9 530 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 TRAV36DV7A0A075B6V5 113 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 BMI1P35226 326 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 TSEN54Q7Z6J9 526 aaKnown RBP10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 OR1L4Q8NGR5 311 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 BCL9LQ86UU0 1499 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 UTS2O95399 124 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 CCR2P41597 374 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 SPNS3Q6ZMD2 512 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 ALG14Q96F25 216 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 ADAP1O75689 374 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 GCGP01275 180 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 GGTA1PQ4G0N0 100 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 RTP2Q5QGT7 225 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 ATOH7Q8N100 152 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 FAHD2AQ96GK7 314 aa10.63□□□□□ -0.71
SHROOM3-201ENST00000296043 NALCNQ8IZF0 1738 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 TRBV11-1A0A0K0K1C0 115 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 FOXE1O00358 373 aaPredicted RBP10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 IGHA1P01876 353 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 BCL3P20749 454 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 CYB561D1Q8N8Q1 229 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 KCNAB1Q14722 419 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 NKAIN4Q8IVV8 208 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 COA3Q9Y2R0 106 aaPredicted RBP10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 MED1Q15648 1581 aaPredicted RBP10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 TIAM2Q8IVF5 1701 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 ADH4P08319 380 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 MUC1P15941 1255 aaPredicted RBP10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 MVDP53602 400 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 ZNF343Q6P1L6 599 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 ZNF646O15015 1829 aaPredicted RBP10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 HPXP02790 462 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 GRPP07492 148 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 KLRB1Q12918 225 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 C12orf54Q6X4T0 127 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 TCTN2Q96GX1 697 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 FAM219BQ5XKK7 198 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 UBTD2Q8WUN7 234 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 EDAQ92838 391 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 GPR84Q9NQS5 396 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 SLC25A37Q9NYZ2 338 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 LAMB1P07942 1786 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 GNG7O60262 68 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 CTSCP53634 463 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 OR13G1Q8NGZ3 307 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 OR1P1Q8NH06 330 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 IGHV3-64DA0A0J9YX35 117 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms