RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 OR6C6A6NF89 314 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF205O95201 554 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 B4GALT1P15291 398 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 PSMB1P20618 241 aaKnown RBP7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 TUBG1P23258 451 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 CDAP32320 146 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 CCR9P51686 369 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 GABRA6Q16445 453 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 RPL22L1Q6P5R6 122 aaKnown RBP7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 LRRN1Q6UXK5 716 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 DCXRQ7Z4W1 244 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 CMTM1Q8IZ96 169 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 DMBX1Q8NFW5 382 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 UBALD1Q8TB05 177 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 SLAMF6Q96DU3 332 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 KCNJ15Q99712 375 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 ABHD6Q9BV23 337 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 TMEM59Q9BXS4 323 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 OR2H1Q9GZK4 316 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 ASH2LQ9UBL3 628 aa7.35□□□□□ -1.23
PTPDC1-201ENST00000288976 A8MXE2 369 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 GABRA5P31644 462 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 MAP2K4P45985 399 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 PTH2RP49190 550 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 GNB1P62873 340 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 PITPNAQ00169 270 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 GNMTQ14749 295 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 P2RY14Q15391 338 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 SFRP5Q5T4F7 317 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 RPRMLQ8N4K4 120 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 STEAP2Q8NFT2 490 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 OR13F1Q8NGS4 319 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 THRSPQ92748 146 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 MAP6Q96JE9 813 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 OPN3Q9H1Y3 402 aaPredicted RBP7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 ZMAT3Q9HA38 289 aaKnown RBP7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 BABAM2Q9NXR7 383 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF221Q9UK13 617 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 PEX16Q9Y5Y5 336 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 TUBAL3A6NHL2 446 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 CRYM-AS1A6NIL9 109 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 DISC1C4P0D8 188 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 FAM157AC9JC47 383 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNHIT1O43257 154 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 SYNGR3O43761 229 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 ORC5O43913 435 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 AMY2AP04746 511 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 OTX1P32242 354 aaPredicted RBP7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 SNRPD2P62316 118 aaKnown RBP7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 SORDQ00796 357 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 SNTB1Q13884 538 aaKnown RBP7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 MEP1BQ16820 701 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 OR4D6Q8NGJ1 314 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 GPR148Q8TDV2 347 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 NDUFB11Q9NX14 153 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 MRM2Q9UI43 246 aaKnown RBP7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 CEBPZOSA8MTT3 80 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF701M0R085 212 aaPredicted RBP7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 HS3ST1O14792 307 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 OGG1O15527 345 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 GPANK1O95872 356 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF81P51508 661 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 C6orf183Q5T699 404 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 SFRP4Q6FHJ7 346 aaPredicted RBP7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 LYPD4Q6UWN0 246 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 C1orf174Q8IYL3 243 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF843Q8N446 348 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 OR5D14Q8NGL3 314 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF837Q96EG3 531 aaPredicted RBP7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 CLEC2DQ9UHP7 191 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 R4GMQ9 66 aa7.34□□□□□ -1.23
PTPDC1-201ENST00000288976 MPZL1O95297 269 aa7.34□□□□□ -1.24
PTPDC1-201ENST00000288976 CRYGSP22914 178 aa7.34□□□□□ -1.24
PTPDC1-201ENST00000288976 CD79BP40259 229 aa7.34□□□□□ -1.24
PTPDC1-201ENST00000288976 TPBGQ13641 420 aa7.34□□□□□ -1.24
PTPDC1-201ENST00000288976 TBRG1Q3YBR2 411 aa7.34□□□□□ -1.24
PTPDC1-201ENST00000288976 SKA3Q8IX90 412 aa7.34□□□□□ -1.24
PTPDC1-201ENST00000288976 RFLNBQ8N5W9 214 aa7.34□□□□□ -1.24
PTPDC1-201ENST00000288976 RELL2Q8NC24 303 aaPredicted RBP7.34□□□□□ -1.24
PTPDC1-201ENST00000288976 OR5H2Q8NGV7 314 aa7.34□□□□□ -1.24
PTPDC1-201ENST00000288976 HPS1Q92902 700 aa7.34□□□□□ -1.24
PTPDC1-201ENST00000288976 C4orf36Q96KX1 117 aa7.34□□□□□ -1.24
PTPDC1-201ENST00000288976 SPACA5Q96QH8 159 aa7.34□□□□□ -1.24
PTPDC1-201ENST00000288976 NKX6-3A6NJ46 265 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 MCRIP1C9JLW8 97 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 SMAD7O15105 426 aaKnown RBP7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 SGCEO43556 437 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 TFAP2AP05549 437 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 RAB3AP20336 220 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 GP2P55259 537 aaKnown RBP7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 RPS23P62266 143 aaKnown RBP7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 OR8G1Q15617 311 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 TIMM23BQ5SRD1 257 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF474Q6S9Z5 364 aaPredicted RBP7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 OR56B2PQ8NGI1 322 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 SECTM1Q8WVN6 248 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 YIPF6Q96EC8 236 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 OPALINQ96PE5 141 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 ST6GALNAC2Q9UJ37 374 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF391Q9UJN7 358 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms