RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CD96P40200 585 aa14.77□□□□□ -0.04
SH3RF1-201ENST00000284637 PRRX2Q99811 253 aa14.77□□□□□ -0.04
SH3RF1-201ENST00000284637 CDC42EP2O14613 210 aa14.77□□□□□ -0.04
SH3RF1-201ENST00000284637 DEFA4P12838 97 aa14.77□□□□□ -0.04
SH3RF1-201ENST00000284637 TWSG1Q9GZX9 223 aa14.77□□□□□ -0.04
SH3RF1-201ENST00000284637 FBXO34Q9NWN3 711 aa14.77□□□□□ -0.04
SH3RF1-201ENST00000284637 XKRY2A2RUG3 117 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 SH2D1BO14796 132 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 GP1BAP07359 652 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 MPGP29372 298 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 NT5CQ8TCD5 201 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 MS4A10Q96PG2 267 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 EXOGQ9Y2C4 368 aaKnown RBP14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 POLDIP2Q9Y2S7 368 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 ZNF320A2RRD8 509 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 SHISA8B8ZZ34 492 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 PLRG1O43660 514 aaKnown RBP14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 PTBP3O95758 552 aaKnown RBP14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 KRTDAPP60985 99 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 FMODQ06828 376 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 CLN3Q13286 438 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 TIGITQ495A1 244 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 OSR2Q8N2R0 312 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 OR5B3Q8NH48 314 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 MRGPRX4Q96LA9 322 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 ZDHHC11Q9H8X9 412 aa14.77□□□□□ -0.05
SH3RF1-201ENST00000284637 TMEM272A0A1B0GTI8 110 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 SERPINE3A8MV23 424 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 COX5AP20674 150 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 UBE2G2P60604 165 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 TMEM196Q5HYL7 178 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 NUBPLQ8TB37 319 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 FER1L6-AS2Q96M78 137 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 LAMB1P07942 1786 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 MED19A0JLT2 244 aaPredicted RBP14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 C4orf47A7E2U8 309 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 SLC25A4P12235 298 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 GPR12P47775 334 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 SLC37A1P57057 533 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 PDCD1Q15116 288 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 PQLC2LA1A4F0 135 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 PMS2P11Q13670 270 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 TMEM178AQ8NBL3 297 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 C4orf45Q96LM5 186 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 SLC35D1Q9NTN3 355 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 CLCF1Q9UBD9 225 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 CTAG2O75638 210 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 CCL11P51671 97 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 PNLIPRP3Q17RR3 467 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 DEFB108BQ8NET1 73 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 SOX7Q9BT81 388 aa14.76□□□□□ -0.05
SH3RF1-201ENST00000284637 OR7C2O60412 319 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 RPLP1P05386 114 aaKnown RBP14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 POLR2GP62487 172 aaKnown RBP eCLIP14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 PUSL1Q8N0Z8 303 aaKnown RBP14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 TRMT61AQ96FX7 289 aaKnown RBP14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 SLC35E1Q96K37 410 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 DECR2Q9NUI1 292 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 LIN7CQ9NUP9 197 aaKnown RBP14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 FAM157BP0CG42 384 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 HOXB3P14651 431 aaPredicted RBP14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 CHRNB4P30926 498 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 LINC01555Q8NAE3 123 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 ARHGAP5-AS1Q96IT6 56 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 GPR87Q9BY21 358 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 CTDSP1Q9GZU7 261 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 SLC17A5Q9NRA2 495 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 GOLT1BQ9Y3E0 138 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 ONECUT2O95948 504 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 GLRA1P23415 457 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 INSM1Q01101 510 aaPredicted RBP14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 ABLIM2Q6H8Q1 611 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 RNF165Q6ZSG1 346 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 ZNF573Q86YE8 665 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 ZNF683Q8IZ20 524 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 RAB18Q9NP72 206 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 CLEC18AA5D8T8 446 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 TNFSF11O14788 317 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 NKX2-2O95096 273 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 SLC25A6P12236 298 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 RGS7BPQ6MZT1 257 aaPredicted RBP14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 CD300LDQ6UXZ3 194 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 FBXL14Q8N1E6 418 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 CLEC18CQ8NCF0 446 aa14.75□□□□□ -0.05
SH3RF1-201ENST00000284637 DTYMKP23919 212 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 SULT1A1P50225 295 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 RAB32Q13637 225 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 FZD2Q14332 565 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 HES1Q14469 280 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 PRSS54Q6PEW0 395 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 PRSS41Q7RTY9 318 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 C10orf111Q8N326 155 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 NOL4LQ96MY1 436 aaPredicted RBP14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 ALKBH3Q96Q83 286 aaPredicted RBP14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 DEFB127Q9H1M4 99 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 LPAR3Q9UBY5 353 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 ALS2Q96Q42 1657 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 MFNGO00587 321 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 RRADP55042 308 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 SCAND1P57086 179 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms