RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 RACK1P63244 317 aaKnown RBP7.89□□□□□ -1.15
NIPBL-201ENST00000282516 TMEM267Q0VDI3 215 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-201ENST00000282516 SLC35E4Q6ICL7 350 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 KIR3DX1Q9H7L2 352 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 MRPS16Q9Y3D3 137 aaKnown RBP7.89□□□□□ -1.15
NIPBL-201ENST00000282516 WSB1Q9Y6I7 421 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 ZNF737O75373 536 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 SLCO2B1O94956 709 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 MMP11P24347 488 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 SHBQ15464 509 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 ABHD17CQ6PCB6 329 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 TBC1D26Q86UD7 250 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 LRRTM3Q86VH5 581 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 VRK3Q8IV63 474 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 SMIM4Q8WVI0 70 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 RPEQ96AT9 228 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 CLDN23Q96B33 292 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 NIPSNAP1Q9BPW8 284 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 PAAF1Q9BRP4 392 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 SLC17A5Q9NRA2 495 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 SLC22A13Q9Y226 551 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 PRSS37A4D1T9 235 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 CST4P01036 141 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 CD1BP29016 333 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 FZD2Q14332 565 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 FAM78AQ5JUQ0 283 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 OSR2Q8N2R0 312 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 MRGPRX4Q96LA9 322 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 ZNF426Q9BUY5 554 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-201ENST00000282516 MYO5AQ9Y4I1 1855 aaKnown RBP7.89□□□□□ -1.15
NIPBL-201ENST00000282516 TTRP02766 147 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 HIST1H1CP16403 213 aaKnown RBP7.89□□□□□ -1.15
NIPBL-201ENST00000282516 ACSM6Q6P461 480 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 SLC36A1Q7Z2H8 476 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 TMEM99Q8N816 258 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 NAA60Q9H7X0 242 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 SIT1Q9Y3P8 196 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 GLI4P10075 376 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 ACAA2P42765 397 aaKnown RBP7.89□□□□□ -1.15
NIPBL-201ENST00000282516 ZNF252P-AS1Q0IIN9 211 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 GPNMBQ14956 572 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 CMC2Q9NRP2 79 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 TCFL5Q9UL49 500 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 GTF3C1Q12789 2109 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 PXNP49023 591 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-201ENST00000282516 ADIPOQQ15848 244 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 SAXO2Q658L1 398 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 SIRT6Q8N6T7 355 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 CORTO00230 105 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 MFNGO00587 321 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 MBTPS2O43462 519 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 LANCL1O43813 399 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 GPANK1O95872 356 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 PRRX1P54821 245 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 TOMM34Q15785 309 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-201ENST00000282516 ETV3LQ6ZN32 361 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 NPEPL1Q8NDH3 523 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 DEFB108BQ8NET1 73 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 OR1N1Q8NGS0 311 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 ZNF391Q9UJN7 358 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 C19orf53Q9UNZ5 99 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-201ENST00000282516 FOXJ3Q9UPW0 622 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 TMED3Q9Y3Q3 217 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 CAMTA1Q9Y6Y1 1673 aa7.89□□□□□ -1.15
NIPBL-201ENST00000282516 HIST1H1EP10412 219 aaKnown RBP7.88□□□□□ -1.15
NIPBL-201ENST00000282516 DIO1P49895 249 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 B2MP61769 119 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 MRPL13Q9BYD1 178 aaKnown RBP7.88□□□□□ -1.15
NIPBL-201ENST00000282516 FLVCR2Q9UPI3 526 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 NDUFB3O43676 98 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 FPR2P25090 351 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 CEBPDP49716 269 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-201ENST00000282516 CD226Q15762 336 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 SLC39A11Q8N1S5 342 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 CLEC5AQ9NY25 188 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 HS3ST3A1Q9Y663 406 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 SLC2A10O95528 541 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 HIST3H3Q16695 136 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 SCD5Q86SK9 330 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 YRDCQ86U90 279 aaKnown RBP7.88□□□□□ -1.15
NIPBL-201ENST00000282516 OR10A7Q8NGE5 316 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 C19orf43Q9BQ61 176 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 FZD9O00144 591 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 MELTFP08582 738 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 PPP1CCP36873 323 aaKnown RBP7.88□□□□□ -1.15
NIPBL-201ENST00000282516 RPL18Q07020 188 aaKnown RBP7.88□□□□□ -1.15
NIPBL-201ENST00000282516 CLLU1Q5K131 121 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 LIPNQ5VXI9 398 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 SPNS3Q6ZMD2 512 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 C6orf201Q7Z4U5 140 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 SLC16A11Q8NCK7 471 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 MORN4Q8NDC4 146 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 OR5M1Q8NGP8 315 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 PP6455Q8WZ26 134 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 MOGAT1Q96PD6 335 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 KDM3BQ7LBC6 1761 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 TDRD15B5MCY1 1934 aaKnown RBP7.88□□□□□ -1.15
NIPBL-201ENST00000282516 CLDN34H7C241 214 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms