RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 TUBG2Q9NRH3 451 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 P4HTMQ9NXG6 502 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 CLDND1Q9NY35 253 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 ST3GAL6Q9Y274 331 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 PLXND1Q9Y4D7 1925 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 A0A1W2PS29 197 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 OR6A2O95222 327 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 SFT2D2O95562 160 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 HSPB1P04792 205 aaKnown RBP8.16□□□□□ -1.1
PDGFC-201ENST00000274071 ACRP10323 421 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 GRPRP30550 384 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 PTGER1P34995 402 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 ACAA2P42765 397 aaKnown RBP8.16□□□□□ -1.1
PDGFC-201ENST00000274071 SUPT4H1P63272 117 aaKnown RBP8.16□□□□□ -1.1
PDGFC-201ENST00000274071 PMPCAQ10713 525 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 FZD2Q14332 565 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 TCTN1Q2MV58 587 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 MPV17LQ2QL34 196 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 RSPO2Q6UXX9 243 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM182Q6ZP80 229 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-201ENST00000274071 ERN2Q76MJ5 926 aaKnown RBP8.16□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF417Q8TAU3 575 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM239Q8WW34 195 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 IL22RA2Q969J5 263 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 PRSS27Q9BQR3 290 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 C5orf66Q9H5L9 145 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 ZCCHC3Q9NUD5 404 aaKnown RBP8.16□□□□□ -1.1
PDGFC-201ENST00000274071 IKZF2Q9UKS7 526 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 LAMTOR2Q9Y2Q5 125 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 MEMO1Q9Y316 297 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 GREB1Q4ZG55 1949 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 USP34Q70CQ2 3546 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 TRAV30A0A087WSZ9 112 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 FGF17O60258 216 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 NUPR1O60356 82 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 MPC1LP0DKB6 136 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 MAPK8P45983 427 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 P2RY1P47900 373 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 VEGFBP49765 207 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 TAS2R31P59538 309 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 ZFP36L1Q07352 338 aaKnown RBP8.16□□□□□ -1.1
PDGFC-201ENST00000274071 TAF10Q12962 218 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 COL9A2Q14055 689 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-201ENST00000274071 ARL6IP1Q15041 203 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 PCK2Q16822 640 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM176BQ3YBM2 270 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-201ENST00000274071 MORN2Q502X0 79 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 C10orf120Q5SQS8 335 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF761Q86XN6 746 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-201ENST00000274071 KLHDC8AQ8IYD2 350 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 OR52E2Q8NGJ4 325 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 DYRK2Q92630 601 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 PRRX2Q99811 253 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 PYGO2Q9BRQ0 406 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 VAMP8Q9BV40 100 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 KLHL28Q9NXS3 571 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 OR6C3Q9NZP0 311 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 MARCH2Q9P0N8 246 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 FUT9Q9Y231 359 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 TRBV5-7A0A0A0MS05 114 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 SLC17A2O00624 439 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 DNAJB6O75190 326 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 CSTAP01040 98 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 PI3P19957 117 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 CFPP27918 469 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 HOGA1Q86XE5 327 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 IL22RA1Q8N6P7 574 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 OR4K13Q8NH42 304 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 FAM71F1Q96KD3 344 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-201ENST00000274071 OR6C1Q96RD1 312 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 MAGEH1Q9H213 219 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM106BQ9NUM4 274 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 KIAA1456Q9P272 454 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 GTF2A1LQ9UNN4 478 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 LAMP3Q9UQV4 416 aa8.16□□□□□ -1.1
PDGFC-201ENST00000274071 BORCS7-ASMTA0A0B4J1R7 106 aa8.15□□□□□ -1.1
PDGFC-201ENST00000274071 VSTM2BA6NLU5 285 aa8.15□□□□□ -1.1
PDGFC-201ENST00000274071 C1QTNF3-AMACRE9PGA6 284 aa8.15□□□□□ -1.1
PDGFC-201ENST00000274071 DEDDO75618 318 aa8.15□□□□□ -1.1
PDGFC-201ENST00000274071 PFN1P07737 140 aaKnown RBP8.15□□□□□ -1.1
PDGFC-201ENST00000274071 FRKP42685 505 aaPredicted RBP8.15□□□□□ -1.1
PDGFC-201ENST00000274071 GGTLC2Q14390 218 aa8.15□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF684Q5T5D7 378 aa8.15□□□□□ -1.1
PDGFC-201ENST00000274071 NPAS4Q8IUM7 802 aa8.15□□□□□ -1.1
PDGFC-201ENST00000274071 CRIPAKQ8N1N5 446 aa8.15□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM256Q8N2U0 113 aa8.15□□□□□ -1.1
PDGFC-201ENST00000274071 ULBP3Q9BZM4 244 aa8.15□□□□□ -1.1
PDGFC-201ENST00000274071 PRSS16Q9NQE7 514 aa8.15□□□□□ -1.1
PDGFC-201ENST00000274071 YIPF1Q9Y548 306 aa8.15□□□□□ -1.1
PDGFC-201ENST00000274071 RFNGQ9Y644 331 aa8.15□□□□□ -1.1
PDGFC-201ENST00000274071 CLEC18AA5D8T8 446 aa8.15□□□□□ -1.11
PDGFC-201ENST00000274071 WDR1O75083 606 aa8.15□□□□□ -1.11
PDGFC-201ENST00000274071 GOSR1O95249 250 aa8.15□□□□□ -1.11
PDGFC-201ENST00000274071 BIDP55957 195 aa8.15□□□□□ -1.11
PDGFC-201ENST00000274071 CLDN18P56856 261 aa8.15□□□□□ -1.11
PDGFC-201ENST00000274071 FAM166AQ6J272 317 aa8.15□□□□□ -1.11
PDGFC-201ENST00000274071 PLXDC2Q6UX71 529 aa8.15□□□□□ -1.11
PDGFC-201ENST00000274071 CLEC18CQ8NCF0 446 aa8.15□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF740Q8NDX6 193 aa8.15□□□□□ -1.11
PDGFC-201ENST00000274071 PINX1Q96BK5 328 aaKnown RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms