RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 LHX6Q9UPM6 363 aa14.57□□□□□ -0.08
VPS54-201ENST00000272322 DHRS7CA6NNS2 312 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 HPNP05981 417 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 FOLR3P41439 243 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 EIF1P41567 113 aaKnown RBP14.56□□□□□ -0.08
VPS54-201ENST00000272322 HTR5AP47898 357 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 SUCLG1P53597 346 aaKnown RBP14.56□□□□□ -0.08
VPS54-201ENST00000272322 CARD18P57730 90 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 OR1S2Q8NGQ3 325 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 OR13G1Q8NGZ3 307 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 RHBDD1Q8TEB9 315 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 PIGCQ92535 297 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 PIGQQ9BRB3 760 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 CCDC163A0A0D9SF12 145 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 H0YIZ8 118 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 TOX3O15405 576 aaPredicted RBP14.56□□□□□ -0.08
VPS54-201ENST00000272322 TMEM127O75204 238 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 RPA2P15927 270 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 ZNF32P17041 273 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 RAB6AP20340 208 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 DHODHQ02127 395 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 MITD1Q8WV92 249 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 ALX4Q9H161 411 aaPredicted RBP14.56□□□□□ -0.08
VPS54-201ENST00000272322 TNFSF18Q9UNG2 199 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 DMXL1Q9Y485 3027 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 TEX13DA0A0J9YY54 714 aaPredicted RBP14.56□□□□□ -0.08
VPS54-201ENST00000272322 B3GALNT1O75752 331 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 P04436 131 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 GDF1P27539 372 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 DUSP1P28562 367 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 NOVA1P51513 510 aaKnown RBP14.56□□□□□ -0.08
VPS54-201ENST00000272322 C3AR1Q16581 482 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 PIGYQ3MUY2 71 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 LINC00696Q6ZRV3 163 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 OR6K3Q8NGY3 331 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 SGK3Q96BR1 496 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 PLA2G3Q9NZ20 509 aa14.56□□□□□ -0.08
VPS54-201ENST00000272322 ZNF850A8MQ14 1090 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 SGCEO43556 437 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 PSMB6P28072 239 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 SCRN3Q0VDG4 424 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 PHLDA2Q53GA4 152 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 PGAP1Q75T13 922 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 GTPBP8Q8N3Z3 284 aaPredicted RBP14.55□□□□□ -0.08
VPS54-201ENST00000272322 OR56B1Q8NGI3 324 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 TMEM230Q96A57 120 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 ZNF2Q9BSG1 426 aaPredicted RBP14.55□□□□□ -0.08
VPS54-201ENST00000272322 C12orf4Q9NQ89 552 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 NXT1Q9UKK6 140 aaKnown RBP14.55□□□□□ -0.08
VPS54-201ENST00000272322 NUP50Q9UKX7 468 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 RAB32Q13637 225 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 RSU1Q15404 277 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 CEACAM16Q2WEN9 425 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 ZNF585AQ6P3V2 769 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 MAML2Q8IZL2 1156 aaPredicted RBP14.55□□□□□ -0.08
VPS54-201ENST00000272322 ZIC4Q8N9L1 334 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 BVESQ8NE79 360 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 REEP6Q96HR9 211 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 IMMP1LQ96LU5 166 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 CDC6Q99741 560 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 EDEM2Q9BV94 578 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 PPA2Q9H2U2 334 aa14.55□□□□□ -0.08
VPS54-201ENST00000272322 ZNF629Q9UEG4 869 aaPredicted RBP14.55□□□□□ -0.08
VPS54-201ENST00000272322 LOC105371267A0A1B0GV96 52 aa14.54□□□□□ -0.08
VPS54-201ENST00000272322 FAM166BA8MTA8 275 aa14.54□□□□□ -0.08
VPS54-201ENST00000272322 CD63P08962 238 aa14.54□□□□□ -0.08
VPS54-201ENST00000272322 AAED1Q7RTV5 226 aa14.54□□□□□ -0.08
VPS54-201ENST00000272322 HRH4Q9H3N8 390 aa14.54□□□□□ -0.08
VPS54-201ENST00000272322 CELA3AP09093 270 aa14.54□□□□□ -0.08
VPS54-201ENST00000272322 AGTR1P30556 359 aa14.54□□□□□ -0.08
VPS54-201ENST00000272322 ASCL1P50553 236 aa14.54□□□□□ -0.08
VPS54-201ENST00000272322 ACOT7LQ6ZUV0 252 aa14.54□□□□□ -0.08
VPS54-201ENST00000272322 SLC25A43Q8WUT9 341 aaPredicted RBP14.54□□□□□ -0.08
VPS54-201ENST00000272322 PCDHB10Q9UN67 800 aa14.54□□□□□ -0.08
VPS54-201ENST00000272322 LSM5Q9Y4Y9 91 aaKnown RBP14.54□□□□□ -0.08
VPS54-201ENST00000272322 HOXD4P09016 255 aaPredicted RBP14.54□□□□□ -0.08
VPS54-201ENST00000272322 ID4P47928 161 aa14.54□□□□□ -0.08
VPS54-201ENST00000272322 SRSF3P84103 164 aaKnown RBP14.54□□□□□ -0.08
VPS54-201ENST00000272322 FADS6Q8N9I5 356 aa14.54□□□□□ -0.08
VPS54-201ENST00000272322 AUP1Q9Y679 476 aa14.54□□□□□ -0.08
VPS54-201ENST00000272322 PINLYPA6NC86 204 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 CHRM2P08172 466 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 ZNF84P51523 738 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 SSBP1Q04837 148 aaKnown RBP14.53□□□□□ -0.08
VPS54-201ENST00000272322 Q0VFX4 171 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 SNTB1Q13884 538 aaKnown RBP14.53□□□□□ -0.08
VPS54-201ENST00000272322 ZSCAN4Q8NAM6 433 aaPredicted RBP14.53□□□□□ -0.08
VPS54-201ENST00000272322 BPIFCQ8NFQ6 507 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 DEPPQ9NTK1 212 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 DHRS3O75911 302 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 NXPH3O95157 252 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 FOXG1P55316 489 aaPredicted RBP14.53□□□□□ -0.08
VPS54-201ENST00000272322 FGL1Q08830 312 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 OR2Y1Q8NGV0 311 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 PECRQ9BY49 303 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 PARPBPQ9NWS1 579 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 TTLL8A6PVC2 850 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 GEMIN2O14893 280 aaKnown RBP14.53□□□□□ -0.08
VPS54-201ENST00000272322 CRHP06850 196 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 RCC1P18754 421 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms