RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 SIGLEC5O15389 551 aa12.49□□□□□ -0.41
SOD1-201ENST00000270142 TSPAN9O75954 239 aa12.49□□□□□ -0.41
SOD1-201ENST00000270142 PRR23D2P0DMB1 279 aaPredicted RBP12.49□□□□□ -0.41
SOD1-201ENST00000270142 PAICSP22234 425 aaKnown RBP12.49□□□□□ -0.41
SOD1-201ENST00000270142 SAA4P35542 130 aa12.49□□□□□ -0.41
SOD1-201ENST00000270142 MNAT1P51948 309 aa12.49□□□□□ -0.41
SOD1-201ENST00000270142 PSMA6P60900 246 aaKnown RBP12.49□□□□□ -0.41
SOD1-201ENST00000270142 TMEM179BQ7Z7N9 219 aa12.49□□□□□ -0.41
SOD1-201ENST00000270142 ZNF454Q8N9F8 522 aa12.49□□□□□ -0.41
SOD1-201ENST00000270142 ELL3Q9HB65 397 aaPredicted RBP12.49□□□□□ -0.41
SOD1-201ENST00000270142 NLKQ9UBE8 527 aa12.49□□□□□ -0.41
SOD1-201ENST00000270142 ZNF816-ZNF321PA0A0X1KG74 233 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 MEIOCA2RUB1 952 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 ARRDC5A6NEK1 342 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 M0R1W7 72 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 RHBDL1O75783 438 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 PAHP00439 452 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 CST1P01037 141 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 RAP2AP10114 183 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 NDUFB7P17568 137 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 GLRA1P23415 457 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 POU1F1P28069 291 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 GPM6AP51674 278 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 EGR3Q06889 387 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 GK3PQ14409 553 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 GINS1Q14691 196 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 BBS1Q8NFJ9 593 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 MED30Q96HR3 178 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 CHID1Q9BWS9 393 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 LRP12Q9Y561 859 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 WNK1Q9H4A3 2382 aa12.48□□□□□ -0.41
SOD1-201ENST00000270142 A0A1W2PQ09 198 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 OR2AT4A6NND4 320 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 ACAA1P09110 424 aaPredicted RBP12.47□□□□□ -0.41
SOD1-201ENST00000270142 TGFBR2P37173 567 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 GABRA2P47869 451 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 UBE2E1P51965 193 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 CAV3P56539 151 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 CEP78Q5JTW2 689 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 NCR3LG1Q68D85 454 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 HCP5Q6MZN7 132 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 C1QL4Q86Z23 238 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 ADGRG5Q8IZF4 528 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 OR5R1Q8NH85 324 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 FAM110DQ8TAY7 271 aaPredicted RBP12.47□□□□□ -0.41
SOD1-201ENST00000270142 C17orf50Q8WW18 174 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 CCDC124Q96CT7 223 aaKnown RBP12.47□□□□□ -0.41
SOD1-201ENST00000270142 ASB9Q96DX5 294 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 DUS3LQ96G46 650 aaKnown RBP12.47□□□□□ -0.41
SOD1-201ENST00000270142 NSL1Q96IY1 281 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 HIST1H2AAQ96QV6 131 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 METTL8Q9H825 291 aaKnown RBP12.47□□□□□ -0.41
SOD1-201ENST00000270142 NIPAL2Q9H841 368 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 ZNF222Q9UK12 451 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 MAB21L2Q9Y586 359 aa12.47□□□□□ -0.41
SOD1-201ENST00000270142 IGKV1D-17A0A075B6S4 117 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 A0A0G2JK05 382 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 ANKRD61A6NGH8 418 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 ZNF732B4DXR9 585 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 PSMD9O00233 223 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 PRODHO43272 600 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 PSG2P11465 335 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 ALOX5APP20292 161 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 SLC2A5P22732 501 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 HCCSP53701 268 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 ACSM1Q08AH1 577 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 DMRTC1Q5HYR2 192 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 SLC35D3Q5M8T2 416 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 SLC35E4Q6ICL7 350 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 C1orf122Q6ZSJ8 110 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 KRT74Q7RTS7 529 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 KRT77Q7Z794 578 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 CPOQ8IVL8 374 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 HS3ST5Q8IZT8 346 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 ZNRF1Q8ND25 227 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 BEND2Q8NDZ0 799 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 FAM81AQ8TBF8 368 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 CLPTM1LQ96KA5 538 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 LRGUKQ96M69 825 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 PPA2Q9H2U2 334 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 OR51I2Q9H344 312 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 FAM206AQ9NX38 181 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 LAMP5Q9UJQ1 280 aa12.46□□□□□ -0.41
SOD1-201ENST00000270142 HMGN1P05114 100 aa12.45□□□□□ -0.42
SOD1-201ENST00000270142 OSMP13725 252 aa12.45□□□□□ -0.42
SOD1-201ENST00000270142 CALB2P22676 271 aa12.45□□□□□ -0.42
SOD1-201ENST00000270142 RPS7P62081 194 aaKnown RBP12.45□□□□□ -0.42
SOD1-201ENST00000270142 GNG3P63215 75 aa12.45□□□□□ -0.42
SOD1-201ENST00000270142 CDK5Q00535 292 aa12.45□□□□□ -0.42
SOD1-201ENST00000270142 BLMHQ13867 455 aa12.45□□□□□ -0.42
SOD1-201ENST00000270142 C2orf68Q2NKX9 166 aa12.45□□□□□ -0.42
SOD1-201ENST00000270142 TRPM8Q7Z2W7 1104 aa12.45□□□□□ -0.42
SOD1-201ENST00000270142 FAM185AQ8N0U4 392 aa12.45□□□□□ -0.42
SOD1-201ENST00000270142 PAPD5Q8NDF8 572 aaKnown RBP12.45□□□□□ -0.42
SOD1-201ENST00000270142 TMEM185AQ8NFB2 350 aa12.45□□□□□ -0.42
SOD1-201ENST00000270142 CANT1Q8WVQ1 401 aa12.45□□□□□ -0.42
SOD1-201ENST00000270142 SF3B6Q9Y3B4 125 aaKnown RBP12.45□□□□□ -0.42
SOD1-201ENST00000270142 VWFP04275 2813 aa12.45□□□□□ -0.42
SOD1-201ENST00000270142 TRBV23-1A0A0A0MS06 115 aa12.44□□□□□ -0.42
SOD1-201ENST00000270142 A0A0U1RQV5 110 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms