RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 PNLDC1Q8NA58 520 aaKnown RBP9.72□□□□□ -0.85
MSH3-201ENST00000265081 OR10D3Q8NH80 312 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 SPACA5Q96QH8 159 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 CITED4Q96RK1 184 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 GPR35Q9HC97 309 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 GON4LQ3T8J9 2241 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 ALPK2Q86TB3 2170 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 BCL2L11O43521 198 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 SFT2D2O95562 160 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 HCKP08631 526 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 DBHP09172 617 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 ECI1P42126 302 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 TAS2R46P59540 309 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 SCRN3Q0VDG4 424 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 HSD17B13Q7Z5P4 300 aaPredicted RBP9.72□□□□□ -0.85
MSH3-201ENST00000265081 ZNF101Q8IZC7 436 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 DHRS9Q9BPW9 319 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 OR2H1Q9GZK4 316 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 RAB18Q9NP72 206 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 P4HTMQ9NXG6 502 aa9.72□□□□□ -0.85
MSH3-201ENST00000265081 SGCEO43556 437 aa9.71□□□□□ -0.85
MSH3-201ENST00000265081 MPIG6BO95866 241 aa9.71□□□□□ -0.85
MSH3-201ENST00000265081 PMP2P02689 132 aa9.71□□□□□ -0.85
MSH3-201ENST00000265081 FAHP16930 419 aa9.71□□□□□ -0.85
MSH3-201ENST00000265081 CLDN18P56856 261 aa9.71□□□□□ -0.85
MSH3-201ENST00000265081 DEFB123Q8N688 67 aa9.71□□□□□ -0.85
MSH3-201ENST00000265081 RBPMSQ93062 196 aaKnown RBP9.71□□□□□ -0.85
MSH3-201ENST00000265081 ZNF775Q96BV0 537 aaPredicted RBP9.71□□□□□ -0.85
MSH3-201ENST00000265081 MPLP40238 635 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 OC90Q02509 493 aaPredicted RBP9.71□□□□□ -0.86
MSH3-201ENST00000265081 SCGB2B2Q4G0G5 96 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 MOB3CQ70IA8 216 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 PXT1Q8NFP0 134 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 SEMA6DQ8NFY4 1073 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 BANF2Q9H503 90 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 CRLF2Q9HC73 371 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 RASL12Q9NYN1 266 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 CABIN1Q9Y6J0 2220 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 G3V3Y1 287 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 CRTAPO75718 401 aaPredicted RBP9.71□□□□□ -0.86
MSH3-201ENST00000265081 PSG4Q00888 419 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 NKPD1Q17RQ9 610 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 FAM209AQ5JX71 171 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 CHST4Q8NCG5 386 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 OR5AP2Q8NGF4 316 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 NKD1Q969G9 470 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 STRADBQ9C0K7 418 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 MFFQ9GZY8 342 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 DNTTIP1Q9H147 329 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 WDR13Q9H1Z4 485 aa9.71□□□□□ -0.86
MSH3-201ENST00000265081 CRYZL1O95825 349 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 COX5BP10606 129 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 ZNF708P17019 499 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 TCN2P20062 427 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 CPT2P23786 658 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 CYB561P49447 251 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 ACOT7LQ6ZUV0 252 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 LHFPL2Q6ZUX7 228 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 TMED4Q7Z7H5 227 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 YRDCQ86U90 279 aaKnown RBP9.7□□□□□ -0.86
MSH3-201ENST00000265081 LRRC18Q8N456 261 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 REEP6Q96HR9 211 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 FAM173AQ9BQD7 235 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 RBM24Q9BX46 236 aaKnown RBP9.7□□□□□ -0.86
MSH3-201ENST00000265081 TIMM10BQ9Y5J6 103 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 COL6A3P12111 3177 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 TECTAO75443 2155 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 CRHP06850 196 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 DTYMKP23919 212 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 GUCA1AP43080 201 aaPredicted RBP9.7□□□□□ -0.86
MSH3-201ENST00000265081 SRSF7Q16629 238 aaKnown RBP eCLIP9.7□□□□□ -0.86
MSH3-201ENST00000265081 RPUSD3Q6P087 351 aaKnown RBP9.7□□□□□ -0.86
MSH3-201ENST00000265081 ESX1Q8N693 406 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 OR2M7Q8NG81 312 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 MARCH1Q8TCQ1 289 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 EMG1Q92979 244 aaKnown RBP9.7□□□□□ -0.86
MSH3-201ENST00000265081 BCO1Q9HAY6 547 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 FOXJ2Q9P0K8 574 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 EDARQ9UNE0 448 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 FXYD6-FXYD2A0A087WZ82 144 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 LNP1A1A4G5 178 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 STMND1H3BQB6 276 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 CDX4O14627 284 aaPredicted RBP9.7□□□□□ -0.86
MSH3-201ENST00000265081 PRKACBP22694 351 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 PCBD1P61457 104 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 IL13RA1P78552 427 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 FAM3AP98173 230 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 Q6ZS49 121 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 RAB11FIP2Q7L804 512 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 OR14L1PQ8NHC6 308 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 FGFBP3Q8TAT2 258 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 PPP1R1CQ8WVI7 109 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 MRPS24Q96EL2 167 aaKnown RBP9.7□□□□□ -0.86
MSH3-201ENST00000265081 CPNE2Q96FN4 548 aaPredicted RBP9.7□□□□□ -0.86
MSH3-201ENST00000265081 CXorf58Q96LI9 332 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 NECAB3Q96P71 396 aaPredicted RBP9.7□□□□□ -0.86
MSH3-201ENST00000265081 SCGB3A2Q96PL1 93 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 FOXB1Q99853 325 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 RNF126Q9BV68 326 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 ARL6Q9H0F7 186 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms