RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 RNF144BQ7Z419 303 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 PEG10Q86TG7 708 aaKnown RBP6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 SYS1Q8N2H4 156 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 GCSAMQ8N6F7 178 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 OR13C3Q8NGS6 347 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 OR13C9Q8NGT0 318 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 OR5P3Q8WZ94 311 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 RGP1Q92546 391 aaPredicted RBP6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 RAB1CQ92928 201 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 RFT1Q96AA3 541 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 MICU1Q9BPX6 476 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 RTL8AQ9BWD3 113 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 SLC22A4Q9H015 551 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 FN3KRPQ9HA64 309 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 YAE1D1Q9NRH1 226 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 INPP5EQ9NRR6 644 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 MRPS18AQ9NVS2 196 aaKnown RBP6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 DUX4Q9UBX2 424 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 ZNF391Q9UJN7 358 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 PCDHB10Q9UN67 800 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 KIAA2026Q5HYC2 2103 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 A0A1B0GWJ7 208 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 EFCAB10A6NFE3 127 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 LRRC30A6NM36 301 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 CEACAM18A8MTB9 384 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 H0YJX3 145 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 HAAOP46952 286 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 CHN2P52757 468 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 GBX2P52951 348 aaPredicted RBP6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 LCN2P80188 198 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 CDK5R1Q15078 307 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 WDR82Q6UXN9 313 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 ANGPTL5Q86XS5 388 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 FGFRL1Q8N441 504 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 SCCPDHQ8NBX0 429 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 OR5T2Q8NGG2 359 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 OR5D18Q8NGL1 313 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 OR11L1Q8NGX0 322 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 OR5AK2Q8NH90 309 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 FGGYQ96C11 551 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 HIST1H2AAQ96QV6 131 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 OR5M11Q96RB7 305 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 C14orf119Q9NWQ9 140 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 CHCHD3Q9NX63 227 aaKnown RBP6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 EXOSC1Q9Y3B2 195 aaKnown RBP6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 MPC1Q9Y5U8 109 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 V9GYS6 101 aa6.08□□□□□ -1.44
DEPDC1B-201ENST00000265036 A0A1W2PPK0 400 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 ACOD1A6NK06 481 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 SYNGR1O43759 233 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 CST4P01036 141 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 GYPAP02724 150 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 MT-ND2P03891 347 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 HEXAP06865 529 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 CALCBP10092 127 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 SELLP14151 372 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 RPS2P15880 293 aaKnown RBP6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 ZNF20P17024 532 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 CCL1P22362 96 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 EEF1B2P24534 225 aaKnown RBP6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 GATA4P43694 442 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 HSPA13P48723 471 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 LMO4P61968 165 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 INSL4Q14641 139 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 MED22Q15528 200 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 UBE2V2Q15819 145 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 SNCBQ16143 134 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 CLVS2Q5SYC1 327 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 LYPD2Q6UXB3 125 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 TMPRSS11AQ6ZMR5 421 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 FAM90A1Q86YD7 464 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 CALHM1Q8IU99 346 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 C11orf53Q8IXP5 236 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 PLPP7Q8NBV4 271 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 MRPL48Q96GC5 212 aaKnown RBP6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 TMEM246Q9BRR3 403 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 ZNF665Q9H7R5 613 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 CNOT2Q9NZN8 540 aaKnown RBP6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 RNF7Q9UBF6 113 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 HHLA2Q9UM44 414 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 CAB39Q9Y376 341 aaPredicted RBP6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 IGKV1-27A0A075B6S5 117 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 PPIAL4EA0A075B759 164 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 PPIAL4DF5H284 164 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 IGHV2-5P01817 119 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 CDK1P06493 297 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 OCM2P0CE71 109 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 OCMP0CE72 109 aaPredicted RBP6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 HSMCR30P0CW71 290 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 PPIAL4FP0DN26 164 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 PIPP12273 146 aaPredicted RBP6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 FOSL1P15407 271 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 CELP19835 753 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 MDH2P40926 338 aaKnown RBP6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 MAP2K4P45985 399 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 POU3F4P49335 361 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 CDH15P55291 814 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 GNG3P63215 75 aa6.07□□□□□ -1.44
DEPDC1B-201ENST00000265036 SLC35A2P78381 396 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms