RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 DBHP09172 617 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 RFC3P40938 356 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 PTGFRP43088 359 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 RAET1LQ5VY80 246 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 APCDD1LQ8NCL9 501 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 GPR132Q9UNW8 380 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 B3GALT1Q9Y5Z6 326 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 TMEM14DPA8MWL7 114 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 M0R036 132 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 ADCYAP1P18509 176 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 PTAFRP25105 342 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 RRADP55042 308 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 TAF9Q16594 264 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 C9orf152Q5JTZ5 239 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 OR2A2Q6IF42 318 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 SYT13Q7L8C5 426 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 MISPQ8IVT2 679 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 OR5AS1Q8N127 324 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 OR13G1Q8NGZ3 307 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 ZNF251Q9BRH9 671 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 ZNF2Q9BSG1 426 aaPredicted RBP11.15□□□□□ -0.62
LIG1-201ENST00000263274 SLC2A8Q9NY64 477 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 NCOA6Q14686 2063 aaPredicted RBP11.15□□□□□ -0.62
LIG1-201ENST00000263274 LOC390937A0A1W2PQ73 354 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 PQLC2LA1A4F0 135 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 IL2RAP01589 272 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 PCK2Q16822 640 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 ANKRD37Q7Z713 158 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 SULF2Q8IWU5 870 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 NOXO1Q8NFA2 376 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 TMEM230Q96A57 120 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 PTX4Q96A99 478 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 PFDN5Q99471 154 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 AKIRIN1Q9H9L7 192 aaPredicted RBP11.15□□□□□ -0.62
LIG1-201ENST00000263274 MYOZ1Q9NP98 299 aaPredicted RBP11.15□□□□□ -0.62
LIG1-201ENST00000263274 GPR173Q9NS66 373 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 UQCC1Q9NVA1 299 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 PIGLQ9Y2B2 252 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 MEMO1Q9Y316 297 aa11.15□□□□□ -0.62
LIG1-201ENST00000263274 LY86O95711 162 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 IFNA21P01568 189 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 GSTP1P09211 210 aaKnown RBP11.14□□□□□ -0.63
LIG1-201ENST00000263274 MAJINQ3KP22 176 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 PHLDA2Q53GA4 152 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 CDCP2Q5VXM1 449 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 OR2AE1Q8NHA4 323 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 SULT4A1Q9BR01 284 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 RPS10P5Q9NQ39 176 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 KNTC1P50748 2209 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 WDFY3Q8IZQ1 3526 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 A0A1W2PR77 199 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 K7EPK0 472 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 XRCC2O43543 280 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 SPRY1O43609 319 aaPredicted RBP11.14□□□□□ -0.63
LIG1-201ENST00000263274 DIRAS3O95661 229 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 SNRNP70P08621 437 aaKnown RBP11.14□□□□□ -0.63
LIG1-201ENST00000263274 PNLIPP16233 465 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 ASCL1P50553 236 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 ABCA11PQ4W5N1 156 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 ETV3LQ6ZN32 361 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 D2HGDHQ8N465 521 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 FAM71E2Q8N5Q1 922 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 FNDC9Q8TBE3 224 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 GLYATL2Q8WU03 294 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 ZNF501Q96CX3 271 aaPredicted RBP11.14□□□□□ -0.63
LIG1-201ENST00000263274 CDX2Q99626 313 aaPredicted RBP11.14□□□□□ -0.63
LIG1-201ENST00000263274 MBTPS2O43462 519 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 EIF1BO60739 113 aaKnown RBP11.14□□□□□ -0.63
LIG1-201ENST00000263274 IGHMP01871 453 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 IFNA4P05014 189 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 MUC1P15941 1255 aaPredicted RBP11.14□□□□□ -0.63
LIG1-201ENST00000263274 EIF1P41567 113 aaKnown RBP11.14□□□□□ -0.63
LIG1-201ENST00000263274 CSNK1A1P48729 337 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 RAB5BP61020 215 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 PEA15Q15121 130 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 ZNF528Q3MIS6 628 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 TSPO2Q5TGU0 170 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.14□□□□□ -0.63
LIG1-201ENST00000263274 SGPP2Q8IWX5 399 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 ARRDC1Q8N5I2 433 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 OR5L2Q8NGL0 311 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 ZC3H10Q96K80 434 aaKnown RBP11.14□□□□□ -0.63
LIG1-201ENST00000263274 C2orf50Q96LR7 162 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 GNRHR2Q96P88 292 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 SPSB2Q99619 263 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 EIF5A2Q9GZV4 153 aaKnown RBP11.14□□□□□ -0.63
LIG1-201ENST00000263274 FSCN3Q9NQT6 498 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 B3GAT1Q9P2W7 334 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 ZNF107Q9UII5 783 aaPredicted RBP11.14□□□□□ -0.63
LIG1-201ENST00000263274 BDP1A6H8Y1 2624 aa11.14□□□□□ -0.63
LIG1-201ENST00000263274 CCDC163A0A0D9SF12 145 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 NPIPA2E9PIF3 369 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 NPIPA3F8WFD2 350 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 ZNHIT1O43257 154 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 NME2P1O60361 137 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 ZFAND5O76080 213 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 PATE4P0C8F1 98 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 RNF224P0DH78 156 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 ADH6P28332 368 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 FCGR2CP31995 323 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms